Co-expression analysis

Gene ID	Gma.1479.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g19120: ERD3 (early-responsive to dehydration 3) (HF=6e-21)
Module size	6 genes
NF	0.17
%ile	38.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.97	Gma.1479.2.S1_at	AW279120	-	-	6e-21	At4g19120	ERD3 (early-responsive to dehydration 3)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.97	GmaAffx.65773.1.S1_at	BI320311	-	-	2e-44	At4g19120	ERD3 (early-responsive to dehydration 3)	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.99	GmaAffx.27367.1.S1_at	BG653618	-	-	7e-9	At1g79690	atnudt3 (Arabidopsis thaliana Nudix hydrolase homolog 3)	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.99	GmaAffx.85171.1.S1_at	BU091668	-	-	7e-6	At5g10710	protein binding	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.99	GmaAffx.56409.1.S1_at	BU965321	-	-	1e-16	At1g08750	GPI-anchor transamidase, putative	O.I.	H.G.	S.X.	Please select
0.07	10.2	0.98	GmaAffx.93620.1.S1_s_at	CF809345	-	-	3e-19	At3g61140	FUS6 (FUSCA 6)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig13970_at, orthologous to the query gene, Gma.1479.2.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	66.9	Contig13970_at	At4g19120	-	-	6e-13	At4g00740	dehydration-responsive protein-related	O.I.	H.G.	S.X.	Please select
0.59	75.8	HVSMEm0012P04r2_at	At4g19120	-	-	3e+0	At3g55646	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	Contig13760_at	At4g19120	-	-	7e+0	At5g46873	-	O.I.	H.G.	S.X.	Please select
0.40	53.1	Contig23209_at	At4g19120	-	-	4e+0	At5g04440	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	Contig18485_at	At4g19120	-	-	2e+0	At4g16095	disease resistance protein-related	O.I.	H.G.	S.X.	Please select
0.21	22.6	Contig12308_at	At4g19120	-	-	1e-5	At3g23530	cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative	O.I.	H.G.	S.X.	Please select
0.19	19.6	Contig14769_at	At4g19120	-	-	8e-1	At3g21830	ASK8 (ARABIDOPSIS SKP1-LIKE 8)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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