Co-expression analysis

Gene ID Gma.14354.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g53610: ATRAB8 (HF=3e-67)
Module size 13 genes
NF 0.58
%ile 88.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5778.80.98Gma.14354.1.S1_atAW755388--3e-67At3g53610ATRAB8O.I.H.G.S.X.
0.7790.30.99Gma.2954.1.S1_atCD404770--4e-34At5g55160SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2)O.I.H.G.S.X.
0.7790.30.99Gma.6353.1.S1_atAI960028--1e-4At1g67250proteasome maturation factor UMP1 family proteinO.I.H.G.S.X.
0.6382.90.98Gma.15883.1.S1_x_atAF255338.120S proteasome subunit-2e-86At1g53850PAE1O.I.H.G.S.X.
0.6282.10.99Gma.11256.1.S1_atCD401123--7e-28At1g56450PBG1O.I.H.G.S.X.
0.5778.80.99Gma.10826.5.S1_x_atBM732455--2e-108At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.S.X.
0.5778.80.99Gma.6150.2.S1_s_atCD416056--1e-23At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)O.I.H.G.S.X.
0.5778.80.99Gma.5581.1.S1_atCD392224--8e-53At3g27430PBB1O.I.H.G.S.X.
0.4867.70.99Gma.5964.1.S1_atAW348696--3e-62At3g13235ubiquitin family proteinO.I.H.G.S.X.
0.4867.70.99Gma.3626.2.S1_x_atBQ612673--2e-60At3g59920ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2)O.I.H.G.S.X.
0.4766.60.99Gma.17905.2.S1_atCD393233--8e-37At4g01320ATSTE24O.I.H.G.S.X.
0.3853.30.99Gma.2892.1.S1_atCD398484--3e-36At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)O.I.H.G.S.X.
0.3548.60.99Gma.5810.2.S1_a_atAI965339--2e-79At3g2634020S proteasome beta subunit E, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.296.0GSM29358416_2089.2B.R181U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29333322_1549.1Q.R078L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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