Co-expression analysis

Gene ID Gma.1413.1.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At1g15880: GOS11 (golgi snare 11) (HF=8e-37)
Module size 6 genes
NF 0.70
%ile 95.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.98Gma.1413.1.S1_a_atAW734487--8e-37At1g15880GOS11 (golgi snare 11)O.I.H.G.S.X.
0.7388.90.98GmaAffx.86728.1.S1_atBI967919--3e-7At4g20380zinc finger protein (LSD1)O.I.H.G.S.X.
0.6181.80.97GmaAffx.86728.3.S1_s_atBG239619--7e-5At1g32540LOL1 (LSD ONE LIKE 1)O.I.H.G.S.X.
0.5071.70.98Gma.4443.1.S1_atAW348382--6e+0At5g23903unknown proteinO.I.H.G.S.X.
0.5071.70.98Gma.10215.1.S1_a_atAY263347.1protein kinase Pti1-1e-73At3g59350serine/threonine protein kinase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
30.299.8GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
29.199.8GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
25.499.8GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.24363.3.S1_at, orthologous to the query gene, Gma.1413.1.S1_a_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.2Ta.24363.3.S1_atAt1g15880--4e+0At3g12630zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.3854.7Ta.10959.1.S1_x_atAt1g15880--4e+0At5g43770proline-rich family proteinO.I.H.G.S.X.
0.1314.6Ta.10959.1.S1_atAt1g15880--4e+0At5g43770proline-rich family proteinO.I.H.G.S.X.
0.023.6TaAffx.11821.1.S1_atAt1g15880--6e-1At1g65484unknown proteinO.I.H.G.S.X.
0.012.4Ta.1892.1.S1_atAt1g15880Vacuolar ATPase subunit G-2e-6At4g23710VAG2O.I.H.G.S.X.
0.012.4Ta.28354.2.S1_x_atAt1g15880--8e-3At4g33640unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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