Co-expression analysis

Gene ID	Gma.13500.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g18940: Mo25 family protein (HF=3e+0)
Module size	6 genes
NF	0.59
%ile	89.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.40	57.1	0.76	Gma.13500.1.A1_at	CD399280	-	-	3e+0	At5g18940	Mo25 family protein	O.I.	H.G.	S.X.	Please select
0.80	91.5	0.79	GmaAffx.780.1.S1_at	BQ081062	-	-	3e-4	At1g19840	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.77	90.3	0.76	GmaAffx.15117.1.S1_at	AW596890	-	-	6e-22	At2g02990	RNS1 (RIBONUCLEASE 1)	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.81	Gma.13474.1.A1_at	CD398666	-	-	8e-1	At1g78520	-	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.80	Gma.20.1.S1_at	X04782.1	nodulin	-	6e-4	At5g37810	NIP4	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.85	Gma.4867.1.S1_at	BE822060	-	-	7e-3	At1g28110	SCPL45 (SERINE CARBOXYPEPTIDASE-LIKE 45 PRECURSOR)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
26.1	99.8	GSM191089	Soybean_Cotyledon_OI1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
25.4	99.8	GSM191090	Soybean_Cotyledon_OI2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
14.7	99.6	GSM201126	Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
13.1	99.5	GSM201127	Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
11.6	99.4	GSM191092	Soybean_Cotyledon_SEED2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
10.8	99.4	GSM191091	Soybean_Cotyledon_SEED1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
8.2	99.0	GSM182046	Laser capture microdissected (LCM) outer integument at the heart stage, biological replicate 2	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
7.6	98.9	GSM182045	Laser capture microdissected (LCM) outer integument at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
7.0	98.8	GSM182047	Whole Seed at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
6.7	98.7	GSM191087	Soybean_Cotyledon_II1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
5.8	98.4	GSM182048	Whole Seed at the heart stage, biological replicate 2	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
5.6	98.3	GSM201120	Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
5.3	98.2	GSM201121	Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
4.9	98.0	GSM191088	Soybean_Cotyledon_II2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
4.2	97.4	GSM201129	Whole Seed at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
4.2	97.4	GSM184829	Whole Seed at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
4.2	97.4	GSM184828	Whole Seed at the globular stage, biological replicate 1	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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