Co-expression analysis

Gene ID Gma.13268.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g60340: maoC-like dehydratase domain-containing protein (HF=2e-18)
Module size 20 genes
NF 0.28
%ile 53.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7388.90.97Gma.13268.1.S1_atCD392209--2e-18At5g60340maoC-like dehydratase domain-containing proteinO.I.H.G.S.X.
0.4259.30.98GmaAffx.65218.1.A1_atBU544013--9e-1At3g02230RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1)O.I.H.G.S.X.
0.3954.50.98Gma.12059.1.S1_atBG651492--2e+0At4g01430nodulin MtN21 family proteinO.I.H.G.S.X.
0.3243.70.97Gma.2809.1.S1_atCD397162--6e-44At4g29160SNF7.1O.I.H.G.S.X.
0.3142.20.98Gma.6975.2.S1_a_atBU546346--4e-1At4g35930-O.I.H.G.S.X.
0.3142.20.98Gma.3632.1.A1_atBI316950--5e-8At3g57480zinc finger (C2H2 type, AN1-like) family proteinO.I.H.G.S.X.
0.3040.40.97GmaAffx.90324.1.S1_atCF806049--2e-26At5g51940NRPB6AO.I.H.G.S.X.
0.2839.00.97Gma.4790.1.S1_atBM270023--5e-23At3g60600VAP (VESICLE ASSOCIATED PROTEIN)O.I.H.G.S.X.
0.2633.90.98GmaAffx.2122.1.S1_atBI498615--5e-1At3g21215RNA-binding protein, putativeO.I.H.G.S.X.
0.2633.90.98Gma.10829.1.S1_atCD404695--1e-4At2g28360-O.I.H.G.S.X.
0.2430.90.98Gma.4975.1.S1_atBI970178--6e-25At5g06420zinc finger (CCCH-type/C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2329.90.98Gma.7858.1.A1_atAW733417--5e-3At1g04230unknown proteinO.I.H.G.S.X.
0.2228.10.97Gma.1538.2.A1_atCA935611--2e-5At4g27000ATRBP45CO.I.H.G.S.X.
0.2228.10.98Gma.13038.1.S1_atBE822071--3e-9At1g45976SBP1 (s-ribonuclease binding protein 1)O.I.H.G.S.X.
0.2126.60.97Gma.10728.1.A1_atCD410733--2e-15At3g19080SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.2025.10.97GmaAffx.83531.1.A1_atBU550540--3e-1At3g09870auxin-responsive family proteinO.I.H.G.S.X.
0.2025.10.98Gma.7345.1.S1_a_atBU547099--8e-8At3g19910zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1923.70.98GmaAffx.71118.1.A1_s_atAW349718--3e-9At4g34660SH3 domain-containing protein 2 (SH3P2)O.I.H.G.S.X.
0.1721.20.98Gma.2835.1.S1_atBI969866--4e-40At5g23450ATLCBK1 (A. THALIANA LONG-CHAIN BASE (LCB) KINASE 1)O.I.H.G.S.X.
0.1619.70.98GmaAffx.46238.1.S1_atBF595415--2e-2At1g805603-isopropylmalate dehydrogenase, chloroplast, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.296.0GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.296.0GSM2931263_C038.1O.R9O1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM184828Whole Seed at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.195.8GSM147935Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.195.8GSM147933Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.195.8GSM209585resistant_12hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.195.8GSM184829Whole Seed at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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