Co-expression analysis

Gene ID Gma.13160.1.S1_at
Gene name ascorbate peroxidase 1, cytosolic
Homology with ArabidopsisSimilar to At1g07890: APX1 (ascorbate peroxidase 1) (HF=5e-23)
Module size 6 genes
NF 0.45
%ile 75.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.99Gma.13160.1.S1_atL10292.1ascorbate peroxidase 1, cytosolic-5e-23At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.5071.70.99Gma.14354.1.S1_atAW755388--3e-67At3g53610ATRAB8O.I.H.G.S.X.
0.4259.30.98Gma.14354.1.S1_x_atAW755388--3e-67At3g53610ATRAB8O.I.H.G.S.X.
0.4057.10.99Gma.6150.2.S1_s_atCD416056--1e-23At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)O.I.H.G.S.X.
0.3346.10.99GmaAffx.93393.1.S1_s_atCF808604ascorbate peroxidase 1, cytosolic /// L-ascorbate peroxidase 2-6e-22At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.2532.60.99Gma.10826.5.S1_x_atBM732455--2e-108At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.496.4GSM29358416_2089.2B.R181U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.76.1.A1_at, orthologous to the query gene, Gma.13160.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6785.8Zm.76.1.A1_atAt1g07890ascorbate peroxidase2-3e-27At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.6785.8Zm.18405.1.A1_atAt1g07890hypothetical protein LOC100193248-3e+0At5g01881unknown proteinO.I.H.G.S.X.
0.6381.1Zm.5919.1.S1_atAt1g07890--4e-2At1g59750ARF1 (AUXIN RESPONSE FACTOR 1)O.I.H.G.S.X.
0.6381.1Zm.10135.1.A1_atAt1g07890--1e+0At5g47550cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.3336.0Zm.5101.1.S1_atAt1g07890hypothetical protein LOC100193724-1e-3At3g01300protein kinase, putativeO.I.H.G.S.X.
0.2622.7Zm.2997.1.S1_atAt1g07890REX1 DNA Repair family protein-6e+0At5g35525unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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