Co-expression analysis

Gene ID	Gma.13160.1.S1_at
Gene name	ascorbate peroxidase 1, cytosolic
Homology with Arabidopsis	Similar to At1g07890: APX1 (ascorbate peroxidase 1) (HF=5e-23)
Module size	6 genes
NF	0.45
%ile	75.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.99	Gma.13160.1.S1_at	L10292.1	ascorbate peroxidase 1, cytosolic	-	5e-23	At1g07890	APX1 (ascorbate peroxidase 1)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	Gma.14354.1.S1_at	AW755388	-	-	3e-67	At3g53610	ATRAB8	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.98	Gma.14354.1.S1_x_at	AW755388	-	-	3e-67	At3g53610	ATRAB8	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.99	Gma.6150.2.S1_s_at	CD416056	-	-	1e-23	At5g59880	ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.99	GmaAffx.93393.1.S1_s_at	CF808604	ascorbate peroxidase 1, cytosolic /// L-ascorbate peroxidase 2	-	6e-22	At1g07890	APX1 (ascorbate peroxidase 1)	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.99	Gma.10826.5.S1_x_at	BM732455	-	-	2e-108	At5g55190	RAN3 (RAN GTPASE 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	96.4	GSM293584	16_2089.2B.R181U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

A co-expression module including the wheat gene, Ta.27473.1.S2_at, orthologous to the query gene, Gma.13160.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	Ta.27473.1.S2_at	At1g07890	-	-	1e-16	At1g07890	APX1 (ascorbate peroxidase 1)	O.I.	H.G.	S.X.	Please select
0.44	64.5	Ta.28199.2.A1_at	At1g07890	-	-	1e-3	At1g65660	SMP1 (SWELLMAP 1)	O.I.	H.G.	S.X.	Please select
0.42	60.9	Ta.28952.1.S1_at	At1g07890	-	-	4e-5	At5g43920	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	Ta.6894.1.S1_at	At1g07890	-	-	1e+0	At3g56540	serine carboxypeptidase, putative	O.I.	H.G.	S.X.	Please select
0.40	58.4	Ta.14051.1.S1_at	At1g07890	-	-	1e-5	At2g38020	VCL1 (VACUOLELESS 1)	O.I.	H.G.	S.X.	Please select
0.36	51.9	Ta.28580.1.S1_at	At1g07890	-	-	4e-9	At2g46260	BTB/POZ domain-containing protein	O.I.	H.G.	S.X.	Please select
0.35	49.8	Ta.28205.1.A1_s_at	At1g07890	-	-	4e+0	At2g01090	ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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