Co-expression analysis

Gene ID Gma.13160.1.S1_at
Gene name ascorbate peroxidase 1, cytosolic
Homology with ArabidopsisSimilar to At1g07890: APX1 (ascorbate peroxidase 1) (HF=5e-23)
Module size 6 genes
NF 0.45
%ile 75.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.99Gma.13160.1.S1_atL10292.1ascorbate peroxidase 1, cytosolic-5e-23At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.5071.70.99Gma.14354.1.S1_atAW755388--3e-67At3g53610ATRAB8O.I.H.G.S.X.
0.4259.30.98Gma.14354.1.S1_x_atAW755388--3e-67At3g53610ATRAB8O.I.H.G.S.X.
0.4057.10.99Gma.6150.2.S1_s_atCD416056--1e-23At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)O.I.H.G.S.X.
0.3346.10.99GmaAffx.93393.1.S1_s_atCF808604ascorbate peroxidase 1, cytosolic /// L-ascorbate peroxidase 2-6e-22At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.2532.60.99Gma.10826.5.S1_x_atBM732455--2e-108At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.496.4GSM29358416_2089.2B.R181U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os07g0694700, orthologous to the query gene, Gma.13160.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8395.8Os07g0694700At1g07890-Ascorbate peroxidase (EC 1.11.1.11)4e-25At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.7793.1Os04g0498600At1g07890-S- adenosylmethionine decarboxylase beta chain]2e-5At5g15948CPuORF10 (Conserved peptide upstream open reading frame 10)O.I.H.G.S.X.
0.6281.5Os06g0130900At1g07890-Histone H3.31e-3At4g40030histone H3.2O.I.H.G.S.X.
0.5877.0Os02g0121300At1g07890-Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)(PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-bindingprotein)9e-12At4g38740ROC1 (ROTAMASE CYP 1)O.I.H.G.S.X.
0.5777.0Os05g0574500At1g07890-GTP-binding nuclear protein RAN1B (Fragment)1e-112At5g20020RAN2O.I.H.G.S.X.
0.5777.0Os11g0425600At1g07890-Four F5 protein family protein5e+0At5g42040RPN12b (Regulatory Particle Non-ATPase 12b)O.I.H.G.S.X.
0.5676.3Os08g0366100At1g07890-EDF-1 protein (HMBF1alpha) (Endothelialdifferentiation-related factor 1, isoform alpha)(Fragment)6e-11At2g42680MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)O.I.H.G.S.X.
0.5573.7Os07g0545400At1g07890-Protein H2A4e-7At5g54640RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5)O.I.H.G.S.X.
0.5068.0Os07g0114300At1g07890-Conserved hypothetical protein3e-1At2g23090unknown proteinO.I.H.G.S.X.
0.4863.7Os01g0813400At1g07890-ADP-ribosylation factor2e-96At2g47170ARF1A1CO.I.H.G.S.X.
0.4762.3Os06g0681400At1g07890-Polyubiquitin1e-160At4g05320UBQ10 (POLYUBIQUITIN 10)O.I.H.G.S.X.
0.4355.4Os08g0126300At1g07890-Glyceraldehyde-3-phosphate dehydrogenase(Fragment)6e-23At1g13440GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)O.I.H.G.S.X.
0.3745.0Os06g0152100At1g07890-Profilin 28e-15At2g19760PRF1 (PROFILIN 1)O.I.H.G.S.X.
0.3440.0Os06g0175900At1g07890-Ubiquinol-cytochrome C reductase complexubiquinone-binding protein QP-C (EC 1.10.2.2)(Ubiquinol-cytochrome C reductase complex 8.2 kDaprotein)3e-7At5g05370ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeO.I.H.G.S.X.
0.3440.0Os03g0710800At1g07890-14-3-3-like protein S946e-57At3g02520GRF7 (GENERAL REGULATORY FACTOR 7)O.I.H.G.S.X.
0.3032.7Os03g0685500At1g07890-CHCH domain containing protein6e-22At5g64400-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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