Co-expression analysis

Gene ID Gma.13160.1.S1_at
Gene name ascorbate peroxidase 1, cytosolic
Homology with ArabidopsisSimilar to At1g07890: APX1 (ascorbate peroxidase 1) (HF=5e-23)
Module size 6 genes
NF 0.45
%ile 75.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.99Gma.13160.1.S1_atL10292.1ascorbate peroxidase 1, cytosolic-5e-23At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.5071.70.99Gma.14354.1.S1_atAW755388--3e-67At3g53610ATRAB8O.I.H.G.S.X.
0.4259.30.98Gma.14354.1.S1_x_atAW755388--3e-67At3g53610ATRAB8O.I.H.G.S.X.
0.4057.10.99Gma.6150.2.S1_s_atCD416056--1e-23At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)O.I.H.G.S.X.
0.3346.10.99GmaAffx.93393.1.S1_s_atCF808604ascorbate peroxidase 1, cytosolic /// L-ascorbate peroxidase 2-6e-22At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.2532.60.99Gma.10826.5.S1_x_atBM732455--2e-108At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.496.4GSM29358416_2089.2B.R181U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig1728_at, orthologous to the query gene, Gma.13160.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4661.0Contig1728_atAt1g07890--1e-14At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.3647.1Contig23742_atAt1g07890--2e-1At1g05270TraB family proteinO.I.H.G.S.X.
0.2935.5Contig10503_atAt1g07890--1e-2At5g53180PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)O.I.H.G.S.X.
0.2224.2Contig3232_atAt1g07890--1e-37At2g44350ATCSO.I.H.G.S.X.
0.1412.9Contig13113_atAt1g07890--1e-2At5g02760protein phosphatase 2C family protein / PP2C family proteinO.I.H.G.S.X.
0.1210.4Contig9134_atAt1g07890--4e-22At4g32600zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.075.8Contig11840_s_atAt1g07890--3e-2At2g25720unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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