Co-expression analysis

Gene ID	Gma.13074.2.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At5g18650: zinc finger (C3HC4-type RING finger) family protein (HF=2e-11)
Module size	29 genes
NF	0.29
%ile	55.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.97	99.8	0.96	Gma.13074.2.S1_a_at	BI972676	-	-	2e-11	At5g18650	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.98	Gma.9193.1.S1_at	BE473615	-	-	1e-22	At1g43130	LCV2 (LIKE COV 2)	O.I.	H.G.	S.X.	Please select
0.45	63.9	0.98	GmaAffx.85638.1.S1_at	BF425777	-	-	4e-13	At5g55000	FIP2	O.I.	H.G.	S.X.	Please select
0.45	63.9	0.98	GmaAffx.88438.1.S1_s_at	BU965425	-	-	9e-23	At2g40650	pre-mRNA splicing factor PRP38 family protein	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	GmaAffx.15284.1.S1_at	BE822730	-	-	6e+0	At1g21880	LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	GmaAffx.58155.1.S1_at	BG726253	-	-	2e-36	At4g32150	ATVAMP711 (ARABIDOPSIS THALIANA VESICLE-ASSOCIATED MEMBRANE PROTEIN 711)	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	Gma.6196.2.S1_a_at	BI972744	-	-	2e-35	At2g14120	dynamin-like protein 2b (ADL2b)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	GmaAffx.90266.1.S1_s_at	CF805991	-	-	8e-20	At5g64760	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.98	Gma.9020.2.S1_at	AI736080	-	-	1e-14	At2g43970	La domain-containing protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	GmaAffx.22482.1.S1_x_at	AW185059	-	-	1e-28	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.15407.4.S1_at	AW185051	-	-	1e-21	At5g52040	ATRSP41	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	GmaAffx.73085.1.S1_at	AW459316	-	-	2e-6	At2g41760	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	GmaAffx.92769.1.S1_s_at	CF808494	-	-	1e-75	At3g19760	eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.98	GmaAffx.92886.1.S1_s_at	CF808611	-	-	3e-41	At5g09900	EMB2107 (EMBRYO DEFECTIVE 2107)	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.98	GmaAffx.91533.1.S1_s_at	CF807258	glutathione reductase	-	9e-26	At3g54660	GR (GLUTATHIONE REDUCTASE)	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.98	GmaAffx.80835.1.S1_s_at	BE347388	-	-	2e-5	At1g49600	ATRBP47A (Arabidopsis thaliana RNA-binding protein 47a)	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	GmaAffx.38743.1.S1_at	BM177648	-	-	4e-4	At5g23340	-	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	Gma.12030.3.S1_a_at	BG359479	-	-	4e+0	At3g47341	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	GmaAffx.89144.1.A1_s_at	CK605580	-	-	2e-21	At3g60600	VAP (VESICLE ASSOCIATED PROTEIN)	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.98	GmaAffx.55210.2.S1_at	BE330623	-	-	3e-32	At2g43070	protease-associated (PA) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.97	GmaAffx.66304.1.S1_at	AW164351	-	-	1e+0	At3g09710	IQD1 (IQ-DOMAIN 1)	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.98	Gma.3757.2.S1_a_at	AI941326	-	-	8e-35	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.98	Gma.11925.1.S1_at	CF922804	-	-	3e-2	At1g11530	ATCXXS1 (C-terminal cysteine residue is changed to a serine 1)	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.98	Gma.10588.1.S1_a_at	BM885841	-	-	2e-2	At1g10720	BSD domain-containing protein	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.98	GmaAffx.85720.2.S1_s_at	BQ785848	-	-	9e-4	At2g33810	SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3)	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.97	GmaAffx.75398.1.S1_at	AW100015	-	-	3e-1	At5g62100	ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.97	Gma.6261.2.S1_at	BM085245	-	-	1e-12	At4g17640	CKB2	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.98	Gma.7528.2.S1_at	BM891312	-	-	3e-49	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	O.I.	H.G.	S.X.	Please select
0.07	10.2	0.98	Gma.5122.1.S1_at	CD417588	-	-	5e-16	At2g18040	PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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