Co-expression analysis

Gene ID Gma.13056.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g29690: ASA2 (ANTHRANILATE SYNTHASE 2) (HF=2e-8)
Module size 6 genes
NF 0.14
%ile 34.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5071.70.98Gma.13056.1.S1_atBG651726--2e-8At2g29690ASA2 (ANTHRANILATE SYNTHASE 2)O.I.H.G.S.X.
0.4057.10.98Gma.5903.2.S1_a_atAW433295--8e-38At5g10540peptidase M3 family protein / thimet oligopeptidase family proteinO.I.H.G.S.X.
0.2126.60.98Gma.7259.1.S1_atCD398809--3e-3At3g24160PMP (PUTATIVE TYPE 1 MEMBRANE PROTEIN)O.I.H.G.S.X.
0.1518.70.98GmaAffx.92055.1.S1_s_atCF807780--5e-6At2g18910hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.0710.20.98GmaAffx.84190.1.S1_atBF068700--1e-17At1g77670aminotransferase class I and II family proteinO.I.H.G.S.X. (Conserved peptide upstream open reading frame 24)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At2g29690, orthologous to the query gene, Gma.13056.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
0.6176.7At2g29690817519ASA2 (ANTHRANILATE SYNTHASE 2)Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis.O.I.H.G.S.X.
0.2726.2At3g07440819932unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.H.G.S.X.
0.146.8At5g48840834942PANC (ARABIDOPSIS HOMOLOG OF BACTERIAL PANC)Encodes a pantothenate synthetase that appears to be located in the cytosol. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. Analysis of the catalytic properties of this enzyme indicate that it might be able to synthesize adequate amounts of pantothenate even in the presence of low levels of pantoate.O.I.H.G.S.X.
0.051.1At2g13440815830glucose-inhibited division family A proteinF:FAD binding;P:tRNA processing, tRNA wobble uridine modification;C:chloroplast;OBMFPAO.I.H.G.S.X.
0.010.2At1g09830837515phosphoribosylamine--glycine ligase (PUR2)glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamideO.I.H.G.S.X.

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