Co-expression analysis

Gene ID Gma.12779.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g02960: zinc finger (C3HC4-type RING finger) family protein (HF=2e-1)
Module size 23 genes
NF 0.83
%ile 98.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8091.50.91Gma.12779.1.A1_atCD397557--2e-1At2g02960zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.9198.60.95GmaAffx.62093.1.A1_atAW349227--6e-1At3g54180CDKB1O.I.H.G.S.X.
0.8893.40.93Gma.5789.1.S1_atCD400514--5e-4At3g20570plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.8893.40.93GmaAffx.28001.1.S1_atBQ453582--3e+0At3g12370ribosomal protein L10 family proteinO.I.H.G.S.X.
0.8793.20.95GmaAffx.10323.1.S1_atBI971552--1e+0At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseO.I.H.G.S.X.
0.8693.00.94GmaAffx.15803.1.S1_atBU760551--2e-1At3g48660unknown proteinO.I.H.G.S.X.
0.8693.00.95GmaAffx.37697.1.S1_atBU083321--4e+0At4g09970unknown proteinO.I.H.G.S.X.
0.8693.00.93Gma.3997.1.S1_atBQ610899--2e+0At5g44100ckl7 (Casein Kinase I-like 7)O.I.H.G.S.X.
0.8693.00.94Gma.13204.1.S1_atBI316229--2e-8At1g29520AWPM-19-like membrane family proteinO.I.H.G.S.X.
0.8492.60.93GmaAffx.50632.1.A1_atBI969115--2e-1At5g43330malate dehydrogenase, cytosolic, putativeO.I.H.G.S.X.
0.8492.60.94GmaAffx.63553.1.S1_atBG352380--4e-3At1g14730-O.I.H.G.S.X.
0.8492.60.95GmaAffx.44716.1.A1_atBI969342--7e-1At4g35970APX5 (ASCORBATE PEROXIDASE 5)O.I.H.G.S.X.
0.8392.50.94GmaAffx.66982.1.S1_atBI970847--2e-1At1g08220-O.I.H.G.S.X.
0.8392.50.94Gma.17136.1.S1_s_atBE022719--6e-1At1g34270exostosin family proteinO.I.H.G.S.X.
0.8191.70.95Gma.13980.1.S1_atCD412403--2e+0At3g49744unknown proteinO.I.H.G.S.X.
0.7990.80.94Gma.5256.1.A1_atCD408042--3e+0At3g23165LCR42 (Low-molecular-weight cysteine-rich 42)O.I.H.G.S.X.
0.7890.60.93Gma.3400.1.S1_atBQ627988--2e+0At2g17130IDH2 (ISOCITRATE DEHYDROGENASE SUBUNIT 2)O.I.H.G.S.X.
0.7689.70.93Gma.13204.2.A1_atCD392690--8e-1At3g57270BG1 (BETA-1,3-GLUCANASE 1)O.I.H.G.S.X.
0.7689.70.94GmaAffx.73021.1.S1_atBE556340--2e-5At4g35970APX5 (ASCORBATE PEROXIDASE 5)O.I.H.G.S.X.
0.7187.80.94GmaAffx.61272.1.S1_atBI972394--1e-2At4g26130unknown proteinO.I.H.G.S.X.
0.6886.40.94GmaAffx.49959.1.S1_atAI441732--1e+0At4g12760unknown proteinO.I.H.G.S.X.
0.6786.10.94GmaAffx.77506.1.S1_atBI424239--8e-1At5g05270chalcone-flavanone isomerase family proteinO.I.H.G.S.X.
0.6786.10.95Gma.5256.2.S1_atAI441316--7e-2At3g20970NFU4O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.7GSM24484525_VP9.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
4.497.6GSM29228128_1185.1E.R113L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.497.6GSM24483423_CON.M2W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
4.297.4GSM24491140_SLO.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
4.097.2GSM24480717_CON.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.997.1GSM24484124_VP9.M2W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.997.1GSM24490339_SLO.M2W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.897.0GSM24484826_VP9.M2W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.897.0GSM24482320_CON.M2W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.796.8GSM2925788_1283.1H.R180L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM24484726_CON.M2W1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.596.6GSM24490038_V71.M2W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.596.6GSM24481619_V71.M2W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.596.6GSM29247674_1281.1G.R179L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM2449328_V71.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.496.4GSM2448181_SLO.M2W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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