Co-expression analysis

Gene ID	Gma.12512.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g11608: - (HF=1e+0)
Module size	6 genes
NF	0.03
%ile	13.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	92.5	0.97	Gma.12512.1.S1_at	CD392421	-	-	1e+0	At1g11608	-	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.97	GmaAffx.83815.1.S1_s_at	BG404904	-	-	1e+0	At1g04330	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.98	Gma.8354.1.S1_at	BE658968	-	-	4e-22	At3g03070	NADH-ubiquinone oxidoreductase-related	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.98	Gma.6495.1.S1_at	BQ612701	-	-	5e-51	At3g25800	PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.97	Gma.5868.1.S1_at	BU084222	-	-	7e-10	At1g19650	SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.97	GmaAffx.89191.1.A1_x_at	CK606438	-	-	1e-20	At3g08520	60S ribosomal protein L41 (RPL41D)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.8927.1.S1_at, orthologous to the query gene, Gma.12512.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	94.0	Zm.8927.1.S1_at	At1g11608	-	-	5e-3	At2g41905	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	88.2	Zm.3350.1.A1_at	At1g11608	DC2 protein	-	4e-29	At5g27720	emb1644 (embryo defective 1644)	O.I.	H.G.	S.X.	Please select
0.44	55.7	Zm.3892.8.S1_at	At1g11608	Elongation factor 1 alpha	-	0	At1g07920	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.40	48.5	Zm.4903.1.S1_at	At1g11608	hypothetical protein LOC100273473	-	1e+0	At3g26085	CAAX amino terminal protease family protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	Zm.6850.1.S1_at	At1g11608	-	-	2e+0	At3g01170	structural constituent of ribosome	O.I.	H.G.	S.X.	Please select
0.31	31.6	Zm.15210.1.A1_at	At1g11608	ARR1 protein-like	-	1e-3	At5g59570	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.15	8.6	Zm.13812.2.S1_x_at	At1g11608	60S ribosomal protein L11-1	-	2e-74	At4g18730	RPL16B	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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