Co-expression analysis

Gene ID	Gma.12512.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g11608: - (HF=1e+0)
Module size	6 genes
NF	0.03
%ile	13.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	92.5	0.97	Gma.12512.1.S1_at	CD392421	-	-	1e+0	At1g11608	-	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.97	GmaAffx.83815.1.S1_s_at	BG404904	-	-	1e+0	At1g04330	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.98	Gma.8354.1.S1_at	BE658968	-	-	4e-22	At3g03070	NADH-ubiquinone oxidoreductase-related	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.98	Gma.6495.1.S1_at	BQ612701	-	-	5e-51	At3g25800	PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.97	Gma.5868.1.S1_at	BU084222	-	-	7e-10	At1g19650	SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.97	GmaAffx.89191.1.A1_x_at	CK606438	-	-	1e-20	At3g08520	60S ribosomal protein L41 (RPL41D)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1615154_at, orthologous to the query gene, Gma.12512.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	1615154_at	At1g11608	hypothetical protein LOC100251043	-	8e-6	At3g09085	unknown protein	O.I.	H.G.	S.X.	Please select
0.82	93.9	1608790_at	At1g11608	hypothetical protein LOC100258653	-	1e-1	At2g25670	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	1611617_at	At1g11608	hypothetical protein LOC100261039	-	3e-1	At4g12150	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	1614177_at	At1g11608	hypothetical protein LOC100261330	-	1e+0	At1g72290	trypsin and protease inhibitor family protein / Kunitz family protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	1617753_at	At1g11608	hypothetical protein LOC100249945	-	3e-1	At4g12380	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	1622541_at	At1g11608	hypothetical protein LOC100258249	-	4e-35	At5g12190	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	1607357_at	At1g11608	hypothetical protein LOC100243628	-	2e-31	At3g21610	-	O.I.	H.G.	S.X.	Please select
0.23	27.5	1616070_at	At1g11608	hypothetical protein LOC100242617	-	3e-111	At2g27600	SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)	O.I.	H.G.	S.X.	Please select
0.17	18.2	1610024_at	At1g11608	hypothetical protein LOC100250743	-	2e-33	At5g20090	unknown protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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