Co-expression analysis

Gene ID	Gma.12512.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g11608: - (HF=1e+0)
Module size	6 genes
NF	0.03
%ile	13.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	92.5	0.97	Gma.12512.1.S1_at	CD392421	-	-	1e+0	At1g11608	-	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.97	GmaAffx.83815.1.S1_s_at	BG404904	-	-	1e+0	At1g04330	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.98	Gma.8354.1.S1_at	BE658968	-	-	4e-22	At3g03070	NADH-ubiquinone oxidoreductase-related	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.98	Gma.6495.1.S1_at	BQ612701	-	-	5e-51	At3g25800	PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.97	Gma.5868.1.S1_at	BU084222	-	-	7e-10	At1g19650	SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.97	GmaAffx.89191.1.A1_x_at	CK606438	-	-	1e-20	At3g08520	60S ribosomal protein L41 (RPL41D)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.111984.1.S1_x_at, orthologous to the query gene, Gma.12512.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.69	86.9	TaAffx.111984.1.S1_x_at	At1g11608	-	-	2e+0	At5g27450	MK (MEVALONATE KINASE)	O.I.	H.G.	S.X.	Please select
0.61	82.0	Ta.621.1.S1_x_at	At1g11608	-	-	2e+1	At3g45730	unknown protein	O.I.	H.G.	S.X.	Please select
0.58	79.2	Ta.3100.1.S1_a_at	At1g11608	-	-	1e-1	At2g43030	ribosomal protein L3 family protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	Ta.16700.1.S1_x_at	At1g11608	-	-	1e+0	At4g24026	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	Ta.18414.1.S1_at	At1g11608	-	-	1e-1	At4g14540	NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)	O.I.	H.G.	S.X.	Please select
0.53	74.9	Ta.16700.1.S1_at	At1g11608	-	-	1e+0	At4g24026	unknown protein	O.I.	H.G.	S.X.	Please select
0.51	73.0	Ta.2884.1.S1_at	At1g11608	-	-	1e-39	At1g03475	LIN2 (LESION INITIATION 2)	O.I.	H.G.	S.X.	Please select
0.50	72.4	Ta.13905.1.A1_at	At1g11608	-	-	5e+0	At3g25660	glutamyl-tRNA(Gln) amidotransferase, putative	O.I.	H.G.	S.X.	Please select
0.50	72.4	Ta.1452.1.S1_x_at	At1g11608	-	-	4e-4	At1g48350	ribosomal protein L18 family protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	Ta.498.1.S1_at	At1g11608	-	-	3e-10	At3g14930	HEME1	O.I.	H.G.	S.X.	Please select
0.41	59.6	Ta.28558.1.S1_at	At1g11608	-	-	5e+0	At1g07645	ATDSI-1VOC (DESSICATION-INDUCED 1VOC SUPERFAMILY PROTEIN)	O.I.	H.G.	S.X.	Please select
0.36	51.9	Ta.3529.1.S1_at	At1g11608	-	-	2e+0	At3g50520	phosphoglycerate/bisphosphoglycerate mutase family protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	TaAffx.16801.1.S1_s_at	At1g11608	-	-	1e+0	At5g23410	-	O.I.	H.G.	S.X.	Please select
0.33	46.9	Ta.10162.1.S1_at	At1g11608	-	-	8e-7	At2g33800	ribosomal protein S5 family protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	Ta.621.2.S1_x_at	At1g11608	-	-	8e+0	At1g74970	RPS9 (RIBOSOMAL PROTEIN S9)	O.I.	H.G.	S.X.	Please select
0.28	39.2	Ta.1381.2.S1_x_at	At1g11608	-	-	2e+0	At3g07480	electron carrier/ iron-sulfur cluster binding	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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