Co-expression analysis

Gene ID Gma.12512.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g11608: - (HF=1e+0)
Module size 6 genes
NF 0.03
%ile 13.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8392.50.97Gma.12512.1.S1_atCD392421--1e+0At1g11608-O.I.H.G.S.X.
0.2228.10.97GmaAffx.83815.1.S1_s_atBG404904--1e+0At1g04330unknown proteinO.I.H.G.S.X.
0.047.00.98Gma.8354.1.S1_atBE658968--4e-22At3g03070NADH-ubiquinone oxidoreductase-relatedO.I.H.G.S.X.
0.035.80.98Gma.6495.1.S1_atBQ612701--5e-51At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)O.I.H.G.S.X.
0.013.40.97Gma.5868.1.S1_atBU084222--7e-10At1g19650SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeO.I.H.G.S.X.
0.013.40.97GmaAffx.89191.1.A1_x_atCK606438--1e-20At3g0852060S ribosomal protein L41 (RPL41D)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.7362.1.A1_at, orthologous to the query gene, Gma.12512.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8397.0PtpAffx.7362.1.A1_atAt1g11608--3e-14At3g09085unknown proteinO.I.H.G.S.X.
0.5582.2Ptp.6376.1.S1_s_atAt1g11608hypothetical protein-3e-2At1g13635methyladenine glycosylase family proteinO.I.H.G.S.X.
0.4774.6Ptp.2412.1.A1_s_atAt1g11608hypothetical protein-2e+0At5g44430PDF1.2c (plant defensin 1.2c)O.I.H.G.S.X.
0.4067.0PtpAffx.133519.1.A1_atAt1g11608hypothetical protein-1e-7At2g28140unknown proteinO.I.H.G.S.X.
0.2441.8Ptp.5779.1.S1_s_atAt1g11608hypothetical protein-3e-2At3g05935unknown proteinO.I.H.G.S.X.
0.1321.6PtpAffx.8040.3.S1_atAt1g11608hypothetical protein-3e-1At5g07250ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage