Co-expression analysis

Gene ID	Gma.12365.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g53540: 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) (HF=1e-16)
Module size	20 genes
NF	0.81
%ile	98.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.72	88.1	0.70	Gma.12365.1.S1_at	BE657436	-	-	1e-16	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	O.I.	H.G.	S.X.	Please select
0.93	99.1	0.81	Gma.2185.3.S1_at	BM887146	-	-	5e-6	At3g25230	ROF1 (ROTAMASE FKBP 1)	O.I.	H.G.	S.X.	Please select
0.92	98.9	0.79	Gma.6606.1.S1_at	AW395303	-	-	8e-64	At5g52640	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	O.I.	H.G.	S.X.	Please select
0.92	98.9	0.79	GmaAffx.69544.2.S1_at	AW569786	-	-	2e-2	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	O.I.	H.G.	S.X.	Please select
0.89	93.5	0.87	GmaAffx.49167.1.S1_at	BE583765	-	-	2e-1	At5g59530	2-oxoglutarate-dependent dioxygenase, putative	O.I.	H.G.	S.X.	Please select
0.86	93.0	0.77	Gma.7766.1.S1_at	BU550058	-	-	6e-3	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	O.I.	H.G.	S.X.	Please select
0.84	92.6	0.82	GmaAffx.21211.1.S1_s_at	BU550606	-	-	3e-78	At5g52640	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	O.I.	H.G.	S.X.	Please select
0.83	92.5	0.82	GmaAffx.72322.1.S1_at	AW570011	-	-	2e-12	At5g48570	peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.78	90.6	0.77	GmaAffx.92386.1.S1_at	CF808111	-	-	4e-77	At5g52640	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	O.I.	H.G.	S.X.	Please select
0.78	90.6	0.78	Gma.17947.1.S1_at	AW568567	-	-	7e-18	At3g46230	ATHSP17.4	O.I.	H.G.	S.X.	Please select
0.78	90.6	0.79	GmaAffx.91098.1.S1_s_at	CF806823	Hsp23.9	-	6e-3	At4g25200	ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)	O.I.	H.G.	S.X.	Please select
0.78	90.6	0.77	GmaAffx.21211.1.S1_at	BU550606	-	-	3e-78	At5g52640	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	O.I.	H.G.	S.X.	Please select
0.78	90.6	0.84	GmaAffx.69544.1.S1_s_at	AW569992	-	-	4e-3	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	O.I.	H.G.	S.X.	Please select
0.76	89.7	0.72	GmaAffx.80951.1.S1_at	BE608612	-	-	3e+0	At3g25190	nodulin, putative	O.I.	H.G.	S.X.	Please select
0.74	89.2	0.75	GmaAffx.89896.1.S1_at	CF805621	-	-	2e-26	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	O.I.	H.G.	S.X.	Please select
0.74	89.2	0.83	GmaAffx.69544.1.S1_x_at	AW569992	-	-	4e-3	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	O.I.	H.G.	S.X.	Please select
0.72	88.1	0.77	GmaAffx.89896.1.S1_s_at	CF805621	-	-	2e-26	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	O.I.	H.G.	S.X.	Please select
0.71	87.8	0.74	GmaAffx.69544.1.S1_at	AW569992	-	-	4e-3	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.79	Gma.1727.1.S1_at	BU084101	-	-	9e-1	At2g01400	unknown protein	O.I.	H.G.	S.X.	Please select
0.64	83.4	0.78	GmaAffx.90913.1.S1_s_at	CF806638	-	-	1e-9	At1g53540	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
34.1	99.9	GSM170927	Rust Innoculated, biological rep2	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
21.7	99.8	GSM170929	Rust Innoculated, biological rep3	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
17.1	99.7	GSM170925	V2 Control, biological rep2	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
14.1	99.6	GSM170926	Rust Innoculated, biological rep1	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
13.4	99.5	GSM170928	V2 Control, biological rep3	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
9.1	99.2	GSM170924	V2 Control, biological rep1	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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