Co-expression analysis

Gene ID	Gma.11922.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g28200: FIP1 (FH INTERACTING PROTEIN 1) (HF=3e+0)
Module size	14 genes
NF	0.43
%ile	73.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.84	92.6	0.98	Gma.11922.1.S1_at	AW394565	-	-	3e+0	At1g28200	FIP1 (FH INTERACTING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	Gma.1630.1.S1_x_at	BF596536	-	-	4e-122	At1g70490	ARFA1D	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.98	GmaAffx.18174.1.S1_at	BU545155	-	-	4e-38	At1g11020	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.99	Gma.3757.2.S1_a_at	AI941326	-	-	8e-35	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.99	Gma.7065.1.S1_at	BQ297832	-	-	1e-7	At1g54080	oligouridylate-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.99	Gma.8323.1.S1_at	BU548446	-	-	1e-26	At5g19680	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.99	Gma.1916.1.S1_at	AW185983	-	-	1e-35	At3g47810	MAG1 (MAIGO 1)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.99	Gma.4155.1.S1_at	CD394281	EREBP/AP2 transcription factor	-	2e-26	At1g53910	RAP2.12	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.99	Gma.15387.1.S1_s_at	CD399274	-	-	8e-55	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.99	Gma.5720.1.S1_s_at	AW348669	-	-	4e-5	At1g51200	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.99	GmaAffx.91748.1.S1_s_at	CF807473	-	-	1e-102	At2g01970	endomembrane protein 70, putative	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.98	Gma.5720.2.S1_a_at	BG652626	-	-	2e-5	At1g51200	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.99	Gma.3839.1.S1_at	CD391787	-	-	2e-69	At1g60780	HAP13 (HAPLESS 13)	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	GmaAffx.8999.1.S1_at	CD403960	-	-	1e-32	At5g25760	PEX4 (PEROXIN4)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage