Co-expression analysis

Gene ID	Gma.1143.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At2g16860: GCIP-interacting family protein (HF=4e-6)
Module size	17 genes
NF	0.34
%ile	61.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.86	93.0	0.97	Gma.1143.1.A1_at	AW278604	-	-	4e-6	At2g16860	GCIP-interacting family protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	GmaAffx.18603.1.S1_at	AW348781	-	-	1e+0	At5g09260	VPS20.2 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20.2)	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.98	Gma.437.1.S1_s_at	CD401627	Profilin, PRO2	-	1e-10	At2g19760	PRF1 (PROFILIN 1)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	Gma.4466.1.S1_at	BQ629041	-	-	2e-13	At5g48160	OBE2 (OBERON2)	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	GmaAffx.92496.1.S1_s_at	CF808221	-	-	1e-75	At1g78870	UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.99	Gma.5722.1.S1_at	BU546228	-	-	1e-14	At4g24100	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	Gma.13106.1.S1_at	CD393221	beclin 1 protein	-	1e-60	At3g61710	autophagy protein Apg6 family	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	Gma.15387.2.S1_at	AW101379	-	-	2e-52	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.99	Gma.10823.2.S1_at	BM307619	-	-	2e-82	At5g36230	eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.98	Gma.16949.1.S1_at	BI945119	-	-	1e-4	At1g01650	aspartic-type endopeptidase/ peptidase	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.98	GmaAffx.99.2.A1_s_at	BE330213	Translationally controlled tumor-like protein	-	3e-1	At3g26670	-	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.98	Gma.952.1.A1_at	BI967610	-	-	7e-1	At1g07790	HTB1	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.98	GmaAffx.71620.1.S1_at	BM523371	-	-	9e-24	At1g26830	ATCUL3 (ARABIDOPSIS THALIANA CULLIN 3)	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.98	GmaAffx.92103.1.S1_s_at	CF806493	translationally controlled tumor-like protein	-	6e-28	At3g16640	TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.98	Gma.11929.1.S1_x_at	AI437723	HMG-1 like protein gene	-	2e-13	At1g20693	HMGB2 (HIGH MOBILITY GROUP B 2)	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.99	Gma.13346.1.S1_at	CD391281	-	-	6e-12	At1g61780	postsynaptic protein-related	O.I.	H.G.	S.X.	Please select
0.13	16.3	0.98	GmaAffx.89191.1.A1_x_at	CK606438	-	-	1e-20	At3g08520	60S ribosomal protein L41 (RPL41D)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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