Co-expression analysis

Gene ID	Gma.11362.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g57230: AGL16 (AGAMOUS-LIKE 16) (HF=1e-4)
Module size	19 genes
NF	0.15
%ile	36.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.90	93.7	0.91	Gma.11362.1.S1_at	AW395011	-	-	1e-4	At3g57230	AGL16 (AGAMOUS-LIKE 16)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.95	GmaAffx.91550.1.S1_at	CF807275	-	-	2e+0	At5g37950	transferase, transferring hexosyl groups	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.96	GmaAffx.60153.1.S1_at	BM523538	-	-	2e+0	At3g07710	-	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.97	Gma.11052.1.S1_at	AI795084	-	-	7e-31	At3g23490	CYN (CYANASE)	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.94	GmaAffx.55205.1.S1_at	BF324543	-	-	8e-1	At1g52270	unknown protein	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.96	Gma.4604.1.S1_at	CA802306	-	-	3e-47	At4g14710	acireductone dioxygenase [iron(II)-requiring]/ metal ion binding	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.95	Gma.17721.1.S1_at	BI784886	-	-	3e-14	At5g01650	macrophage migration inhibitory factor family protein / MIF family protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.97	Gma.254.1.S1_at	AF404403.1	acyl-CoA oxidase	-	2e-45	At2g35690	ACX5 (ACYL-COA OXIDASE 5)	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	Gma.5594.1.S1_at	BQ786297	-	-	1e-9	At3g09840	CDC48 (CELL DIVISION CYCLE 48)	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.97	Gma.5058.1.A1_at	BI968633	-	-	3e+0	At1g06180	ATMYB13 (MYB DOMAIN PROTEIN 13)	O.I.	H.G.	S.X.	Please select
0.13	16.3	0.96	Gma.6986.2.S1_at	BI972259	-	-	7e-16	At1g76150	maoC-like dehydratase domain-containing protein	O.I.	H.G.	S.X.	Please select
0.13	16.3	0.94	GmaAffx.76875.2.S1_at	CA953488	-	-	4e-33	At3g26618	ERF1-3 (eukaryotic release factor 1-3)	O.I.	H.G.	S.X.	Please select
0.13	16.3	0.96	Gma.14087.1.S1_at	CD415281	-	-	8e-9	At3g03310	lecithin:cholesterol acyltransferase family protein / LACT family protein	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.97	Gma.2311.1.S1_at	AF141602.1	cystathionine-gamma-synthase precursor	-	4e-34	At3g01120	MTO1 (METHIONINE OVERACCUMULATION 1)	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.97	Gma.6668.1.S1_at	CD409399	-	-	1e+0	At2g18210	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.97	Gma.10647.1.S1_at	AI431164	-	-	1e-23	At4g34270	TIP41-like family protein	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.98	Gma.7635.1.S1_at	AW310136	-	-	9e-7	At2g41790	peptidase M16 family protein / insulinase family protein	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.97	Gma.3138.1.S1_at	BM885656	peroxisomal short-chain dehydrogenase/reductase family protein	-	4e-5	At4g05530	IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1)	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.96	Gma.15119.1.A1_at	BE823149	-	-	3e-13	At3g16310	mitotic phosphoprotein N' end (MPPN) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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