Co-expression analysis

Gene ID	Gma.11341.3.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At4g17900: zinc-binding family protein (HF=8e-26)
Module size	6 genes
NF	0.48
%ile	78.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	81.8	0.98	Gma.11341.3.S1_s_at	BM177332	-	-	8e-26	At4g17900	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	GmaAffx.92861.1.S1_s_at	CF808586	-	-	8e-2	At1g20693	HMGB2 (HIGH MOBILITY GROUP B 2)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	GmaAffx.24666.1.S1_at	CA783210	-	-	2e-1	At2g39705	RTFL8 (ROTUNDIFOLIA LIKE 8)	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.98	GmaAffx.65140.1.S1_at	BI700031	-	-	7e-2	At4g33670	L-galactose dehydrogenase (L-GalDH)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	Gma.17739.1.S1_at	AW310535	-	-	4e-1	At2g04220	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	PsAffx.psHA006iH10r_s_at	PsAffx.psHA006iH10r	-	-	1e+0	At2g28140	unknown protein	O.I.	H.G.	S.X.	Please select

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage