Co-expression analysis

Gene ID	Gma.11341.3.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At4g17900: zinc-binding family protein (HF=8e-26)
Module size	6 genes
NF	0.48
%ile	78.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	81.8	0.98	Gma.11341.3.S1_s_at	BM177332	-	-	8e-26	At4g17900	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	GmaAffx.92861.1.S1_s_at	CF808586	-	-	8e-2	At1g20693	HMGB2 (HIGH MOBILITY GROUP B 2)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	GmaAffx.24666.1.S1_at	CA783210	-	-	2e-1	At2g39705	RTFL8 (ROTUNDIFOLIA LIKE 8)	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.98	GmaAffx.65140.1.S1_at	BI700031	-	-	7e-2	At4g33670	L-galactose dehydrogenase (L-GalDH)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	Gma.17739.1.S1_at	AW310535	-	-	4e-1	At2g04220	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	PsAffx.psHA006iH10r_s_at	PsAffx.psHA006iH10r	-	-	1e+0	At2g28140	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.10461.1.S1_at, orthologous to the query gene, Gma.11341.3.S1_s_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	69.1	Zm.10461.1.S1_at	At4g17900	-	-	3e+0	At2g25605	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	ZmAffx.1050.1.A1_at	At4g17900	-	-	3e+0	At4g35025	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	ZmAffx.877.1.A1_at	At4g17900	-	-	8e-1	At5g16240	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	O.I.	H.G.	S.X.	Please select
0.33	36.0	Zm.5388.1.S1_at	At4g17900	hypothetical protein LOC100193632	-	6e-23	At3g09180	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	Zm.54.1.S1_at	At4g17900	alpha-amylase	-	3e-3	At4g25000	AMY1 (ALPHA-AMYLASE-LIKE)	O.I.	H.G.	S.X.	Please select
0.32	33.4	Zm.19091.1.S1_at	At4g17900	fiber protein Fb2	-	2e+0	At3g06820	mov34 family protein	O.I.	H.G.	S.X.	Please select
0.28	28.1	ZmAffx.1074.1.S1_at	At4g17900	-	-	1e+1	At2g42210	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	O.I.	H.G.	S.X.	Please select
0.27	24.6	Zm.19271.1.A1_at	At4g17900	hypothetical protein LOC100274689	-	3e-4	At1g17980	nucleotidyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.24	19.8	Zm.1674.1.S1_at	At4g17900	hypothetical protein LOC100217253	-	9e-10	At1g30470	SIT4 phosphatase-associated family protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	Zm.4006.1.A1_at	At4g17900	hypothetical protein LOC100216950	-	2e+0	At4g22530	embryo-abundant protein-related	O.I.	H.G.	S.X.	Please select
0.15	8.6	Zm.136.1.S1_at	At4g17900	Fd VI	-	3e+1	Atmg00540	-	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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