Co-expression analysis

Gene ID Gma.11284.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g35960: NHL12 (HF=2e-4)
Module size 9 genes
NF 0.19
%ile 42.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8993.50.97Gma.11284.1.S1_atAW153035--2e-4At2g35960NHL12O.I.H.G.S.X.
0.4057.10.98GmaAffx.93189.1.S1_s_atCF808914--2e-67At5g64370BETA-UP (beta-ureidopropionase)O.I.H.G.S.X.
0.3142.20.98GmaAffx.87604.1.S1_atAW596527--9e-1At5g60360AALP (Arabidopsis aleurain-like protease)O.I.H.G.S.X.
0.3142.20.98GmaAffx.84862.1.S1_atAI965964--1e-29At5g61240protein bindingO.I.H.G.S.X.
0.2735.70.98GmaAffx.93138.1.S1_s_atCF808863--2e-27At2g32080PUR ALPHA-1O.I.H.G.S.X.
0.1417.50.98GmaAffx.91636.1.S1_s_atCF807361--3e-63At1g57870ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)O.I.H.G.S.X.
0.1316.30.98Gma.5244.3.S1_a_atBM893397--1e-32At2g32080PUR ALPHA-1O.I.H.G.S.X.
0.1114.20.99Gma.5720.2.S1_a_atBG652626--2e-5At1g51200zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.0811.00.98GmaAffx.85336.1.S1_atBG047448--5e-18At1g69510-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os11g0157200, orthologous to the query gene, Gma.11284.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9799.9Os11g0157200At2g35960-Harpin-induced 1 domain containing protein1e-4At3g52470harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.3032.7Os08g0558600At2g35960-Vesicle-associated membrane protein 727(AtVAMP727)6e-7At3g54300ATVAMP727 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 727)O.I.H.G.S.X.
0.3032.7Os05g0121000At2g35960-Protein of unknown function DUF1218 family protein6e-1At2g20030zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2831.1Os03g0151900At2g35960-Small GTP-binding protein1e-32At3g54840ARA6O.I.H.G.S.X.
0.2321.2Os01g0182200At2g35960-Small basic membrane integral protein ZmSIP1-24e-11At3g04090SIP1A (SMALL AND BASIC INTRINSIC PROTEIN 1A)O.I.H.G.S.X.
0.2219.4Os02g0590800At2g35960-Protein kinase domain containing protein1e-12At3g20860ATNEK5 (NIMA-RELATED KINASE5)O.I.H.G.S.X.
0.2117.9Os01g0248400At2g35960-NADP-dependent isocitrate dehydrogenase2e-38At1g54340ICDH (ISOCITRATE DEHYDROGENASE)O.I.H.G.S.X.
0.1712.6Os01g0589500At2g35960--1e-1At3g12130KH domain-containing protein / zinc finger (CCCH type) family proteinO.I.H.G.S.X.
0.1611.3Os02g0174200At2g35960-Protein kinase domain containing protein4e-9At2g24360serine/threonine/tyrosine kinase, putativeO.I.H.G.S.X.
0.1611.3Os01g0111900At2g35960-Conserved hypothetical protein1e-1At3g06750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.127.2Os01g0357900At2g35960-Rapid alkalinization factor 29e-2At3g16570RALFL23 (ralf-like 23)O.I.H.G.S.X.
0.127.2Os03g0308000At2g35960-Ubiquitin-conjugating enzymes domain containingprotein5e-11At3g17000UBC32 (ubiquitin-conjugating enzyme 32)O.I.H.G.S.X.
0.094.9Os07g0159500At2g35960-Conserved hypothetical protein3e-3At5g45410unknown proteinO.I.H.G.S.X.
0.084.2Os07g0484300At2g35960-Zn-finger, RING domain containing protein5e+0At5g08139zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.084.2Os04g0390000At2g35960-2-oxoglutarate dehydrogenase, E1 component6e-49At5g657502-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putativeO.I.H.G.S.X.
0.073.7Os05g0455800At2g35960-Protein of unknown function DUF649 domaincontaining protein1e-2At5g56140KH domain-containing proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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