Co-expression analysis

Gene ID	Gma.11154.1.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At1g63220: C2 domain-containing protein (HF=4e-7)
Module size	24 genes
NF	0.23
%ile	46.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.96	99.6	0.96	Gma.11154.1.S1_a_at	AW309927	-	-	4e-7	At1g63220	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.96	GmaAffx.90332.1.S1_at	CF806057	-	-	2e-1	At5g25880	ATNADP-ME3 (NADP-malic enzyme 3)	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.97	Gma.12531.1.S1_at	BG508441	-	-	4e-4	At3g25420	scpl21 (serine carboxypeptidase-like 21)	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.96	GmaAffx.86175.1.S1_at	AW349132	-	-	1e+0	At1g51410	cinnamyl-alcohol dehydrogenase, putative (CAD)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	Gma.4271.1.S1_at	BI970177	-	-	4e-1	At5g28050	cytidine/deoxycytidylate deaminase family protein	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.97	GmaAffx.93071.1.S1_s_at	CF808796	-	-	2e-52	At5g13420	transaldolase, putative	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.98	Gma.3655.1.S1_at	BI469601	-	-	2e-9	At4g02860	catalytic	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.22584.1.S1_at	BG652004	-	-	1e-3	At4g03160	-	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.98	Gma.11126.1.S1_at	AI960156	-	-	5e-30	At5g11670	ATNADP-ME2 (NADP-malic enzyme 2)	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.98	Gma.7611.2.S1_a_at	CA935779	-	-	4e-19	At2g38710	AMMECR1 family	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.98	Gma.17399.1.S1_at	BG041871	-	-	1e-10	At4g33910	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.97	GmaAffx.70975.1.S1_at	BQ741725	-	-	5e-25	At3g58600	-	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.98	GmaAffx.58953.1.S1_at	BG156309	-	-	3e-10	At5g48020	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.98	Gma.11126.1.S1_x_at	AI960156	-	-	5e-30	At5g11670	ATNADP-ME2 (NADP-malic enzyme 2)	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.98	Gma.4970.2.S1_a_at	BI971469	-	-	9e-14	At4g19880	-	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.97	GmaAffx.83662.1.S1_at	BE802851	-	-	4e-87	At5g03290	isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.97	GmaAffx.92014.1.S1_s_at	CF807739	-	-	1e-81	At2g18230	AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2)	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	Gma.18001.2.S1_a_at	BM731619	-	-	9e-47	At3g22110	PAC1	O.I.	H.G.	S.X.	Please select
0.17	21.2	0.98	Gma.17344.2.S1_s_at	BU080862	-	-	4e-13	At2g33040	ATP synthase gamma chain, mitochondrial (ATPC)	O.I.	H.G.	S.X.	Please select
0.16	19.7	0.97	Gma.4507.2.S1_a_at	CA785274	-	-	4e-9	At3g43740	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.16	19.7	0.98	Gma.6321.1.S1_at	CD417415	-	-	6e-10	At5g48570	peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.98	Gma.3929.2.S1_s_at	BE329777	-	-	4e+0	At1g30070	SGS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.13	16.3	0.98	GmaAffx.92555.1.S1_s_at	CF808280	-	-	2e-113	At5g20020	RAN2	O.I.	H.G.	S.X.	Please select
0.09	12.0	0.98	GmaAffx.91720.1.S1_s_at	CF807445	-	-	6e-12	At2g21870	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage