Co-expression analysis

Gene ID Gma.10960.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At1g20510: OPCL1 (OPC-8:0 COA LIGASE1) (HF=2e-29)
Module size 6 genes
NF 0.23
%ile 47.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5576.30.97Gma.10960.1.S1_s_atBQ453915--2e-29At1g20510OPCL1 (OPC-8:0 COA LIGASE1)O.I.H.G.S.X.
0.5071.70.98GmaAffx.93379.1.S1_s_atCF809104--2e-24At1g49670NQRO.I.H.G.S.X.
0.3650.80.97Gma.6885.1.A1_atBU545705--2e-2At3g51780ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4)O.I.H.G.S.X.
0.3040.40.97GmaAffx.64117.1.S1_atBG239723--1e-5At1g67970AT-HSFA8O.I.H.G.S.X.
0.2329.90.98GmaAffx.2179.1.S1_atCD407818--6e-22At4g22990SPX (SYG1/Pho81/XPR1) domain-containing proteinO.I.H.G.S.X.
0.0811.00.97Gma.1106.1.S1_atCD416163--1e-1At5g53330-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.18403.1.A1_at, orthologous to the query gene, Gma.10960.1.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8395.6Zm.18403.1.A1_atAt1g20510hypothetical protein LOC100274307-5e-3At5g381204-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinO.I.H.G.S.X.
0.5369.1Zm.12073.1.S1_atAt1g20510hypothetical protein LOC100276174-4e+0At5g57500transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.3844.2Zm.3959.2.A1_a_atAt1g20510hypothetical protein LOC100193090 /// hypothetical protein LOC100216942 /// integral membrane protein like-1e-20At1g34020transporter-relatedO.I.H.G.S.X.
0.2724.6Zm.1659.1.A1_atAt1g20510hypothetical protein LOC100194135-3e+0At1g79010NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY)O.I.H.G.S.X.
0.2622.7Zm.14138.2.A1_atAt1g20510hypothetical protein LOC100275347-3e-9At1g56423unknown proteinO.I.H.G.S.X.
0.125.9Zm.69.1.A1_atAt1g20510--4e-4At1g54580ACP2 (ACYL CARRIER PROTEIN 2)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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