Co-expression analysis

Gene ID Gma.10860.3.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g52220: - (HF=1e+0)
Module size 6 genes
NF 0.53
%ile 84.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.98Gma.10860.3.A1_atBE210775--1e+0At5g52220-O.I.H.G.S.X.
0.6181.80.98Gma.10860.1.S1_atAW350087--7e-26At4g19860lecithin:cholesterol acyltransferase family protein / LACT family proteinO.I.H.G.S.X.
0.6080.70.99Gma.10860.1.S1_a_atAW350087--9e-13At4g19860lecithin:cholesterol acyltransferase family protein / LACT family proteinO.I.H.G.S.X.
0.5071.70.98Gma.11227.1.S1_a_atCD411629--2e-47At2g01600epsin N-terminal homology (ENTH) domain-containing proteinO.I.H.G.S.X.
0.4057.10.99Gma.11227.2.S1_x_atAW310759--6e-3At1g14910epsin N-terminal homology (ENTH) domain-containing proteinO.I.H.G.S.X.
0.2839.00.98Gma.12076.1.S1_atCD410539--1e-45At4g31860protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.396.2GSM2931263_C038.1O.R9O1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29421869_3140.2H.R9H3P_new, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29310520_C054.1O.R9O3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage