Co-expression analysis

Gene ID Gma.10860.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g19860: lecithin:cholesterol acyltransferase family protein / LACT family protein (HF=7e-26)
Module size 6 genes
NF 0.63
%ile 92.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.10.99Gma.10860.1.S1_atAW350087--7e-26At4g19860lecithin:cholesterol acyltransferase family protein / LACT family proteinO.I.H.G.S.X.
0.8091.50.99Gma.10860.1.S1_a_atAW350087--9e-13At4g19860lecithin:cholesterol acyltransferase family protein / LACT family proteinO.I.H.G.S.X.
0.7790.30.98Gma.10860.3.A1_atBE210775--1e+0At5g52220-O.I.H.G.S.X.
0.4665.50.99Gma.12076.1.S1_atCD410539--1e-45At4g31860protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.4057.10.99Gma.5237.1.S1_atBQ298220--8e-10At3g55960NLI interacting factor (NIF) family proteinO.I.H.G.S.X.
0.3650.80.99Gma.2063.1.S1_atAB070857.2aspartic proteinase 2-2e-8At1g11910aspartyl protease family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.496.4GSM2931263_C038.1O.R9O1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM29310520_C054.1O.R9O3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29259626_C146.1I.V7I1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM209594resistant_12hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.095.6GSM29289065_C202.1L.R9L1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.22543.1.S1_at, orthologous to the query gene, Gma.10860.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9199.2PtpAffx.22543.1.S1_atAt4g19860hypothetical protein-5e-26At4g19860lecithin:cholesterol acyltransferase family protein / LACT family proteinO.I.H.G.S.X.
0.5582.2PtpAffx.73725.1.S1_atAt4g19860hypothetical protein-6e-3At3g25100CDC45 (cell division cycle 45)O.I.H.G.S.X.
0.5380.5PtpAffx.126087.1.S1_atAt4g19860hypothetical protein-6e-34At4g30600signal recognition particle receptor alpha subunit family proteinO.I.H.G.S.X.
0.4471.9PtpAffx.150221.1.S1_atAt4g19860hypothetical protein-2e-6At5g53000TAP46 (2A phosphatase associated protein of 46 kD)O.I.H.G.S.X.
0.4268.6PtpAffx.132923.1.S1_s_atAt4g19860hypothetical protein-1e-38At4g39910ATUBP3 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 3)O.I.H.G.S.X.
0.2747.1Ptp.5319.1.S1_s_atAt4g19860hypothetical protein-1e+0At4g16140proline-rich family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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