Co-expression analysis

Gene ID	Gma.10835.1.S1_at
Gene name	tyrosine aminotransferase
Homology with Arabidopsis	Similar to At5g53970: aminotransferase, putative (HF=7e-17)
Module size	15 genes
NF	0.48
%ile	78.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.76	89.7	0.91	Gma.10835.1.S1_at	CD406757	tyrosine aminotransferase	-	7e-17	At5g53970	aminotransferase, putative	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.92	GmaAffx.89996.1.S1_s_at	CF805721	-	-	1e+0	At5g59110	subtilisin-like serine protease-related	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.94	GmaAffx.19618.1.A1_at	BU544352	-	-	7e-24	At1g43670	fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative	O.I.	H.G.	S.X.	Please select
0.58	78.8	0.95	Gma.3888.2.S1_at	BM139532	-	-	3e-18	At5g56640	MIOX5	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.95	GmaAffx.10497.1.S1_at	AW201969	-	-	5e-1	At5g17170	ENH1 (enhancer of sos3-1)	O.I.	H.G.	S.X.	Please select
0.54	74.8	0.94	Gma.3888.3.S1_at	BI427065	-	-	1e+0	At5g04238	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.95	GmaAffx.78028.2.S1_at	BQ272775	-	-	3e-13	At1g32200	ATS1	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.95	Gma.1691.1.S1_at	BQ740676	-	-	7e-43	At1g80160	lactoylglutathione lyase family protein / glyoxalase I family protein	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.95	GmaAffx.73451.1.S1_at	BG046889	-	-	8e-2	At4g13330	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.93	Gma.7161.1.S1_at	BU545192	-	-	2e-4	At1g67480	kelch repeat-containing F-box family protein	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.92	GmaAffx.61707.1.S1_at	AI900156	-	-	1e+1	At5g40500	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.95	GmaAffx.92059.1.S1_at	CF807784	-	-	2e-6	At2g33710	AP2 domain-containing transcription factor family protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.94	Gma.8147.2.S1_at	BU547713	-	-	4e-13	At1g70290	ATTPS8	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.93	GmaAffx.11178.1.A1_at	CD405831	-	-	3e+0	At5g27770	60S ribosomal protein L22 (RPL22C)	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.95	GmaAffx.78028.1.S1_at	BE209389	-	-	2e-14	At1g32200	ATS1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.8	98.4	GSM292730	75_C165.1J.R9J1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.7	98.4	GSM292384	59_C093.1F.R9F1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.6	98.3	GSM244920	5_VP9.I5L2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.4	98.2	GSM294047	96_3095.2F.R9F1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3	98.2	GSM293080	7_C033.1N.R9N3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.2	98.1	GSM294007	5_3095.2F.R9F1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.1	98.1	GSM293015	20_1089.1N.R055L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM294303	54_3153.2I.R9I2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM292793	53_C197.1K.R9K3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM292405	9_C101.1F.R9F2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM292542	55_C135.1H.R9H2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM292359	28_C099.1F.V7F2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM292292	39_C075.1E.R9E1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM292164	19_C009.1A.R9A2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM292522	37_C129.1H.R9H1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM294383	42_2451.2J.R290L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM294151	16_3139.2H.R9H3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM293408	90_C079.1Q.R9Q2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM294266	22_2417.2I.R236L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292791	51_1403.1K.R250L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292845	24_1445.1L.R272L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM293706	42_3053.2C.R9C3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM292240	49_C033.1B.R9B3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293965	21_2245.2F.R272L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM294279	32_3161.2I.R9I3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM293294	77_C067.1P.R9P3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM294112	68_3117.2G.R9G2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM293938	84_3083.2E.R9E2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292274	19_C089.1E.R9E3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292966	44_C221.1M.R9M1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage