Co-expression analysis

Gene ID Gma.10782.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At1g56070: LOS1 (HF=0)
Module size 6 genes
NF 0.68
%ile 94.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.99Gma.10782.1.S1_s_atCD410674--0At1g56070LOS1O.I.H.G.S.X.
0.7388.90.99Gma.3820.1.S1_atAW156783--9e-34At1g30230elongation factor 1-beta / EF-1-betaO.I.H.G.S.X.
0.7388.90.99Gma.317.1.S1_s_atCD416707--3e-49At2g4184040S ribosomal protein S2 (RPS2C)O.I.H.G.S.X.
0.5778.80.99Gma.4208.2.S1_x_atCD401340--2e-34At1g22780PFL (POINTED FIRST LEAVES)O.I.H.G.S.X.
0.5071.70.99GmaAffx.51048.1.S1_s_atBM521698--6e-5At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)O.I.H.G.S.X.
0.3650.80.99Gma.11219.1.S1_s_atCD395846--1e-16At1g1593040S ribosomal protein S12 (RPS12A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.598.3GSM237069Soy_shoot apical meristem2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
5.098.0GSM237068Soy_shoot apical meristemGSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
4.998.0GSM267288Axillary meristem from 10-day-old soybean seedlings repliacte 2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
4.697.7GSM29358416_2089.2B.R181U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.697.7GSM309341Wild type 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
4.597.7GSM309342Wild type 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
4.397.5GSM309343transgenic RNAiOleosin, biol rep 1, tech rep 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
4.297.4GSM309528storage protein suppression expt, control tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
4.297.4GSM182029Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.197.3GSM191079Soybean_Cotyledon_ES1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.097.2GSM182030Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
3.997.1GSM29224356_C025.1B.SLB2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM309527storage protein suppression expt, control tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
3.897.0GSM309344transgenic RNAiOleosin, biol rep 1, tech rep 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
3.796.8GSM182031Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
3.696.7GSM309531storage protein suppression expt, RNAi biol rep2, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
3.596.6GSM191080Soybean_Cotyledon_ES2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.496.4GSM29358920_2073.2B.R308L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM201130Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
3.496.4GSM201115Laser capture microdissected (LCM) cotyledon adaxial parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.496.4GSM147934Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.396.2GSM147933Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.296.0GSM182036Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
3.296.0GSM201111Laser capture microdissected (LCM) cotyledon abaxial parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.095.6GSM191076Soybean_Cotyledon_EP2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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