Co-expression analysis

Gene ID	Gma.1069.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g32600: hydroxyproline-rich glycoprotein family protein (HF=3e-14)
Module size	13 genes
NF	0.46
%ile	77.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.74	89.2	0.98	Gma.1069.1.S1_at	BI944189	-	-	3e-14	At2g32600	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.98	GmaAffx.91570.1.A1_s_at	CF807732	-	-	4e-78	At1g71230	CSN5B (COP9-SIGNALOSOME 5B)	O.I.	H.G.	S.X.	Please select
0.59	79.5	0.98	Gma.16127.1.S1_at	BE473742	-	-	8e-56	At1g10840	TIF3H1	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.98	Gma.13041.1.S1_at	CD396718	-	-	2e-1	At1g02440	ATARFD1A (ADP-ribosylation factor D1A)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.99	Gma.954.1.S1_at	BI423790	-	-	7e-3	At2g45640	SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18)	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.99	Gma.2136.3.S1_at	BE057237	-	-	4e-156	At3g05530	RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE 5A)	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.98	Gma.8035.1.S1_at	CA802740	-	-	1e+0	At1g27650	ATU2AF35A	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	Gma.10782.1.S1_s_at	CD410674	-	-	0	At1g56070	LOS1	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	GmaAffx.51048.1.S1_s_at	BM521698	-	-	6e-5	At1g29150	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	GmaAffx.19085.1.S1_at	BU547298	-	-	3e-27	At5g04920	vacuolar protein sorting 36 family protein / VPS36 family protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	Gma.13346.1.S1_at	CD391281	-	-	6e-12	At1g61780	postsynaptic protein-related	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	Gma.4208.2.S1_x_at	CD401340	-	-	2e-34	At1g22780	PFL (POINTED FIRST LEAVES)	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.99	Gma.11256.1.S1_at	CD401123	-	-	7e-28	At1g56450	PBG1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	96.4	GSM237068	Soy_shoot apical meristem	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.3	96.2	GSM258502	Vegetative shoot apical meristem, replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.3	96.2	GSM267288	Axillary meristem from 10-day-old soybean seedlings repliacte 2	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.2	96.0	GSM237069	Soy_shoot apical meristem2	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.1	95.8	GSM267287	Axillary meristem from 10-day-old soybean seedlings	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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