Co-expression analysis

Gene ID Gma.10326.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At2g45300: 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase (HF=6e-60)
Module size 6 genes
NF 0.57
%ile 87.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8392.50.97Gma.10326.1.S1_s_atCD414575--6e-60At2g453003-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthaseO.I.H.G.S.X.
0.6786.10.97Gma.5590.1.S1_a_atBE822176--7e-108At1g224102-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putativeO.I.H.G.S.X.
0.5071.70.97Gma.5590.1.S1_atBE822176--7e-108At1g224102-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putativeO.I.H.G.S.X.
0.4057.10.97GmaAffx.90764.1.S1_s_atCF805757--8e-42At2g453003-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthaseO.I.H.G.S.X.
0.4057.10.97Gma.5458.1.S1_atAW309669--4e-114At1g10670ACLA-1O.I.H.G.S.X.
0.4057.10.97GmaAffx.93494.1.A1_s_atCF809219chalcone isomerase 4-like-3e-4At5g05270chalcone-flavanone isomerase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.998.0GSM17166626_V.E.I.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.697.7GSM17163218_W.E.I.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.497.6GSM17165322_Z.E.I.3, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.197.3GSM1716993_W.I.I.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.197.3GSM17168630_V.F.I.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.897.0GSM17160812_Y.E.I.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.696.7GSM1717147_V.I.I.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.596.6GSM17165924_W.F.I.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.496.4GSM17161614_Y.F.I.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.496.4GSM1717167_Y.I.I.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.396.2GSM17169131_W.L.I.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.296.0GSM17163018_Z.I.I.3, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.195.8GSM29252439_C137.1H.SLH2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29232875_C081.1E.SLE2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM24479815_CON.I3U1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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