Co-expression analysis

Gene ID Gma.10004.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g36290: unknown protein (HF=6e-25)
Module size 6 genes
NF 0.82
%ile 98.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5979.50.97Gma.10004.1.S1_atBF070937--6e-25At5g36290unknown proteinO.I.H.G.S.X.
0.9198.60.97Gma.1913.1.S1_atBI970928--0At2g37620ACT1 (ACTIN 1)O.I.H.G.S.X.
0.8392.50.97Gma.1324.1.S1_atBE658235--1e-131At4g35950ARAC6 (ARABIDOPSIS RAC-LIKE 6)O.I.H.G.S.X.
0.8091.50.97Gma.7774.1.S1_atCD401719--1e-26At3g105403-phosphoinositide-dependent protein kinase, putativeO.I.H.G.S.X.
0.8091.50.98Gma.15367.1.S1_atCD412241--7e-60At3g59910-O.I.H.G.S.X.
0.6786.10.98Gma.2135.1.S1_a_atBE660424--7e-1At3g26400EIF4B1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.399.8GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
28.499.8GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
25.899.8GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.6482.1.S1_at, orthologous to the query gene, Gma.10004.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9097.9PtpAffx.6482.1.S1_atAt5g36290predicted membrane protein-4e-82At5g36290unknown proteinO.I.H.G.S.X.
0.3153.7PtpAffx.31246.1.S1_atAt5g36290hypothetical protein-1e+0At3g61640AGP20O.I.H.G.S.X.
0.2850.5PtpAffx.249.318.A1_s_atAt5g36290hypothetical protein-9e-15At2g35690ACX5 (ACYL-COA OXIDASE 5)O.I.H.G.S.X.
0.2543.6PtpAffx.104546.1.S1_atAt5g36290potassium efflux antiporter-9e-43At5g51710KEA5O.I.H.G.S.X.
0.2340.5PtpAffx.20885.1.S1_a_atAt5g36290hypothetical protein-9e-3At3g47300SELT (SELT-LIKE PROTEIN PRECURSOR)O.I.H.G.S.X.
0.2340.5PtpAffx.76483.1.A1_s_atAt5g36290hypothetical protein-8e-24At4g04910NSF (N-ethylmaleimide sensitive factor)O.I.H.G.S.X.
0.2238.3Ptp.654.1.S1_atAt5g36290hypothetical protein-5e-7At4g37830cytochrome c oxidase-relatedO.I.H.G.S.X.
0.2034.6PtpAffx.16094.1.S1_atAt5g36290hypothetical protein-6e-13At1g15350unknown proteinO.I.H.G.S.X.
0.2034.6PtpAffx.88257.1.S1_atAt5g36290hypothetical protein-6e-3At3g56640exocyst complex subunit Sec15-like family proteinO.I.H.G.S.X.
0.2034.6PtpAffx.208454.1.S1_atAt5g36290hypothetical protein-3e-1At3g05920heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.2034.6PtpAffx.5430.2.S1_atAt5g36290hypothetical protein-4e-4At5g47090unknown proteinO.I.H.G.S.X.
0.2034.6Ptp.314.1.A1_atAt5g36290hypothetical protein-2e-24At5g57300UbiE/COQ5 methyltransferase family proteinO.I.H.G.S.X.
0.1932.7PtpAffx.80063.3.A1_s_atAt5g36290hypothetical protein-4e-10At5g48630cyclin family proteinO.I.H.G.S.X.
0.1830.8PtpAffx.1192.1.A1_atAt5g36290hypothetical protein-6e-10At1g51350armadillo/beta-catenin repeat family proteinO.I.H.G.S.X.
0.1830.8PtpAffx.131235.1.S1_s_atAt5g36290hypothetical protein-8e-6At5g11710epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedO.I.H.G.S.X.
0.1729.1PtpAffx.52166.1.A1_atAt5g36290hypothetical protein-5e+0At5g46115unknown proteinO.I.H.G.S.X.
0.1729.1Ptp.2697.1.S1_atAt5g36290hypothetical protein-1e-91At1g50140ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.
0.1525.3PtpAffx.97165.1.A1_atAt5g36290--1e-1At5g13340unknown proteinO.I.H.G.S.X.
0.1525.3Ptp.1416.1.A1_s_atAt5g36290hypothetical protein-2e-34At5g48580FKBP15-2O.I.H.G.S.X.
0.1423.5PtpAffx.110877.1.S1_s_atAt5g36290hypothetical protein-1e+0Atmg01300-O.I.H.G.S.X.
0.1423.5PtpAffx.5890.2.S1_a_atAt5g36290hypothetical protein-5e-3At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)O.I.H.G.S.X.
0.1423.5Ptp.5357.1.S1_atAt5g36290hypothetical protein-5e-69At4g17530ATRAB1CO.I.H.G.S.X.
0.1219.6Ptp.4866.1.S1_atAt5g36290--9e-105At5g44240haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.1219.6Ptp.4216.1.S1_atAt5g36290glycosyl transferase-3e-45At1g27600glycosyl transferase family 43 proteinO.I.H.G.S.X.
0.1219.6PtpAffx.141227.1.A1_s_atAt5g36290hypothetical protein-6e-19At5g48520unknown proteinO.I.H.G.S.X.
0.1219.6PtpAffx.50507.1.A1_s_atAt5g36290--2e-18At5g55290ATP synthase subunit H family proteinO.I.H.G.S.X.
0.1118.1Ptp.2558.1.S1_atAt5g36290hypothetical protein-0At1g78900VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A)O.I.H.G.S.X.
0.1118.1PtpAffx.44916.2.A1_atAt5g36290hypothetical protein-5e-13At1g09020SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4)O.I.H.G.S.X.
0.1016.3PtpAffx.123845.1.S1_s_atAt5g36290hypothetical protein-2e-21At4g02500XT2 (UDP-XYLOSYLTRANSFERASE 2)O.I.H.G.S.X.
0.0812.9PtpAffx.139993.1.A1_atAt5g36290hypothetical protein-7e-3At3g19420ATPEN2 (ARABIDOPSIS THALIANA PTEN 2)O.I.H.G.S.X.
0.0711.6Ptp.273.1.S1_x_atAt5g36290hypothetical protein-2e-24At3g42050vacuolar ATP synthase subunit H family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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