Co-expression analysis

Gene ID Gma.10004.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g36290: unknown protein (HF=6e-25)
Module size 6 genes
NF 0.82
%ile 98.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5979.50.97Gma.10004.1.S1_atBF070937--6e-25At5g36290unknown proteinO.I.H.G.S.X.
0.9198.60.97Gma.1913.1.S1_atBI970928--0At2g37620ACT1 (ACTIN 1)O.I.H.G.S.X.
0.8392.50.97Gma.1324.1.S1_atBE658235--1e-131At4g35950ARAC6 (ARABIDOPSIS RAC-LIKE 6)O.I.H.G.S.X.
0.8091.50.97Gma.7774.1.S1_atCD401719--1e-26At3g105403-phosphoinositide-dependent protein kinase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.399.8GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
28.499.8GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
25.899.8GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os08g0528500, orthologous to the query gene, Gma.10004.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4660.9Os08g0528500At5g36290-Protein of unknown function UPF0016 family protein3e-2At5g36290unknown proteinO.I.H.G.S.X.
0.138.2Os04g0567800At5g36290-Dof zinc finger protein9e-17At2g37590Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.073.7Os07g0686900At5g36290-Alpha-L-arabinofuranosidase6e-12At3g10740ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1)O.I.H.G.S.X.
0.063.0Os02g0549200At5g36290-Ser Thr specific protein kinase-like protein3e-16At1g01540protein kinase family proteinO.I.H.G.S.X.
0.031.4Os01g0532900At5g36290-Callose synthase 1 catalytic subunit1e-12At1g06490ATGSL07 (glucan synthase-like 7)O.I.H.G.S.X.
0.021.0Os03g0192600At5g36290-Plant lipid transfer protein/Par allergen familyprotein6e-1At2g22122unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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