Co-expression analysis

Gene ID Gma.1.1.A1_at
Gene name lipoxygenase
Homology with ArabidopsisSimilar to At5g20180: ribosomal protein L36 family protein (HF=5e-1)
Module size 6 genes
NF 0.00
%ile 3.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.78Gma.1.1.A1_atU36442.1lipoxygenase-5e-1At5g20180ribosomal protein L36 family proteinO.I.H.G.S.X.
0.024.50.95GmaAffx.90612.1.S1_atCF806337--2e-14At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)O.I.H.G.S.X.
-1.40.95GmaAffx.83815.1.S1_s_atBG404904--1e+0At1g04330unknown proteinO.I.H.G.S.X.
-1.40.92Gma.13586.1.S1_atCD401142--1e+0At3g48970copper-binding family proteinO.I.H.G.S.X.
-1.40.92GmaAffx.93566.1.S1_atCF809291--1e+0At3g51030ATTRX1O.I.H.G.S.X.
-1.40.95Gma.6806.2.S1_a_atBE806131--9e-13At3g05230signal peptidase subunit family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.698.9GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.208501.1.S1_at, orthologous to the query gene, Gma.1.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6791.1PtpAffx.208501.1.S1_atAt5g20180--7e-1At3g27430PBB1O.I.H.G.S.X.
0.3153.7PtpAffx.33750.1.A1_atAt5g20180hypothetical protein-2e-16At5g65470unknown proteinO.I.H.G.S.X.
0.3052.0PtpAffx.30489.1.A1_atAt5g20180--8e-1At3g51750unknown proteinO.I.H.G.S.X.
0.2950.5PtpAffx.214767.1.S1_atAt5g20180cyclic nucleotide-gated channel-8e-10At4g30360ATCNGC17O.I.H.G.S.X.
0.2747.1PtpAffx.45099.1.S1_s_atAt5g20180hypothetical protein-2e-3At2g15730unknown proteinO.I.H.G.S.X.
0.2645.2PtpAffx.81806.1.A1_atAt5g20180--2e+0At2g40085unknown proteinO.I.H.G.S.X.
0.2441.8PtpAffx.70456.1.A1_atAt5g20180hypothetical protein-2e+0At3g58600-O.I.H.G.S.X.
0.1932.7PtpAffx.208317.1.S1_atAt5g20180hypothetical protein-5e-8At1g24160unknown proteinO.I.H.G.S.X.
0.1932.7PtpAffx.121653.1.A1_atAt5g20180hypothetical protein-7e-5At2g16405transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.1932.7PtpAffx.127856.1.A1_atAt5g20180hypothetical protein-1e-1At2g19830SNF7.2O.I.H.G.S.X.
0.1932.7PtpAffx.134623.1.A1_atAt5g20180--2e+0At5g39870unknown proteinO.I.H.G.S.X.
0.1830.8PtpAffx.222153.1.S1_atAt5g20180hypothetical protein-3e-2Atmg00030-O.I.H.G.S.X.
0.1626.9Ptp.4172.1.A1_atAt5g20180hypothetical protein-2e-4At3g61790seven in absentia (SINA) family proteinO.I.H.G.S.X.
0.1525.3PtpAffx.213720.1.S1_atAt5g20180hypothetical protein-9e-9At3g51610unknown proteinO.I.H.G.S.X.
0.1525.3PtpAffx.121356.1.A1_atAt5g20180--2e+0At5g49820emb1879 (embryo defective 1879)O.I.H.G.S.X.
0.1321.6PtpAffx.43521.2.S1_atAt5g20180--2e-2At2g17500auxin efflux carrier family proteinO.I.H.G.S.X.
0.0914.6PtpAffx.207965.1.S1_atAt5g20180hypothetical protein-4e-5At1g13570F-box family proteinO.I.H.G.S.X.
0.0812.9PtpAffx.19046.1.S1_atAt5g20180dihydrofolate reductase-thymidylate synthase-7e-1At2g16370THY-1 (THYMIDYLATE SYNTHASE 1)O.I.H.G.S.X.
0.0812.9PtpAffx.118111.1.S1_atAt5g20180--1e+0At5g61200-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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