Co-expression analysis

Gene ID EBro08_SQ009_E20_at
Gene name
Homology with ArabidopsisSimilar to At3g01440: oxygen evolving enhancer 3 (PsbQ) family protein (HF=1e+0)
Module size 6 genes
NF 0.00
%ile 0.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.61EBro08_SQ009_E20_atEBro08_SQ009_E20--1e+0At3g01440oxygen evolving enhancer 3 (PsbQ) family proteinO.I.H.G.S.X.
0.054.10.78Contig25268_atContig25268--3e+0At5g24090acidic endochitinase (CHIB1)O.I.H.G.S.X.
-0.20.81HP01H02w_atHP01H02w--1e+1At5g6230040S ribosomal protein S20 (RPS20C)O.I.H.G.S.X.
-0.20.75EBro04_SQ002_A10_atEBro04_SQ002_A10--4e+0At5g40730AGP24O.I.H.G.S.X.
-0.20.78Contig1133_atContig1133--1e-15At5g22880HTB2O.I.H.G.S.X.
-0.20.79Contig1478_s_atContig1478--2e+0At3g17300-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.699.4GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
9.599.0GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
7.898.6GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
6.698.2GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.296.3GSM146363Maythorpe Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.795.5GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
3.795.5GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.494.8GSM16082238% SWC rep3GSE6990Barley drought stressLink to GEO
3.494.8GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.394.6GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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