Co-expression analysis

Gene ID EBro08_SQ006_M09_at
Gene name
Homology with ArabidopsisSimilar to At4g10040: CYTC-2 (cytochrome c-2) (HF=2e-2)
Module size 6 genes
NF 0.08
%ile 10.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.81EBro08_SQ006_M09_atEBro08_SQ006_M09--2e-2At4g10040CYTC-2 (cytochrome c-2)O.I.H.G.S.X.
0.3342.60.94Contig18435_atContig18435--3e-1At2g42770peroxisomal membrane 22 kDa family proteinO.I.H.G.S.X.
0.1311.60.96Contig3268_atContig3268--3e-30At3g2634020S proteasome beta subunit E, putativeO.I.H.G.S.X.
0.043.40.94Contig9745_atContig9745--3e+0At5g53330-O.I.H.G.S.X.
0.043.40.94HX12B17r_atHX12B17r--1e+0At2g34310unknown proteinO.I.H.G.S.X.
0.032.60.93Contig2799_atContig2799--9e-41At2g30970ASP1 (ASPARTATE AMINOTRANSFERASE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.099.7GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
14.099.5GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
6.998.3GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.897.8GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.597.6GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.995.8GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.795.5GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.695.3GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
3.494.8GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
3.194.1GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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