Co-expression analysis

Gene ID EBro08_SQ003_C15_at
Gene name
Homology with ArabidopsisSimilar to At3g21850: ASK9 (ARABIDOPSIS SKP1-LIKE 9) (HF=2e-2)
Module size 6 genes
NF 0.05
%ile 6.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.76EBro08_SQ003_C15_atEBro08_SQ003_C15--2e-2At3g21850ASK9 (ARABIDOPSIS SKP1-LIKE 9)O.I.H.G.S.X.
0.2326.10.89HW04A13u_x_atHW04A13u--2e+1At5g66270zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.064.80.93HV05G21u_x_atHV05G21u--1e+1At5g12110elongation factor 1B alpha-subunit 1 (eEF1Balpha1)O.I.H.G.S.X.
0.054.10.91HU12E11u_atHU12E11u--1e+0At3g01185unknown proteinO.I.H.G.S.X.
0.021.80.91HC112G04_T3_atHC112G04_T3--1e-30At1g04270RPS15 (CYTOSOLIC RIBOSOMAL PROTEIN S15)O.I.H.G.S.X.
0.011.10.91Contig16016_atContig16016--2e+0At1g59710-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.099.6GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
15.599.6GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
8.698.8GSM238426Endosperm 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.498.5GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.497.5GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.496.6GSM282028Malting_day1_Merit_rep1GSE11200Expression data from malting barley seedsLink to GEO
4.296.3GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.196.2GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.895.7GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.695.3GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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