Co-expression analysis

Gene ID EBro07_SQ002_K15_x_at
Gene name
Homology with ArabidopsisSimilar to At5g26717: - (HF=6e-2)
Module size 6 genes
NF 0.01
%ile 1.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.30.87EBro07_SQ002_K15_x_atEBro07_SQ002_K15--6e-2At5g26717-O.I.H.G.S.X.
0.3138.60.87rbaal30a10_s_atrbaal30a10--2e-1At3g05060SAR DNA-binding protein, putativeO.I.H.G.S.X.
0.054.10.87HVSMEf0011J01r2_s_atHVSMEf0011J01r2--6e-2At4g38920ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3)O.I.H.G.S.X.
0.021.80.86Contig9302_s_atContig9302--3e+0At2g46780RNA binding / nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.011.10.86Contig3808_s_atContig3808--7e-6At4g04080ISU3 (ISCU-LIKE 3)O.I.H.G.S.X.
0.011.10.86HVSMEa0012G14f_atHVSMEa0012G14f--1e+1At5g50540unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.899.8GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
11.999.3GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
9.599.0GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
4.997.1GSM398282Moroc9-75_5d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.296.3GSM6890127 h control replicate 1GSE3097Barley1 salinity stress studyLink to GEO
4.296.3GSM398278Moroc9-75_1d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.196.2GSM398281Moroc9-75_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.494.8GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM398276Moroc9-75_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.294.3GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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