Co-expression analysis

Gene ID EBro07_SQ002_B11_at
Gene name
Homology with ArabidopsisSimilar to At3g56380: ARR17 (ARABIDOPSIS RESPONSE REGULATOR 17) (HF=3e+0)
Module size 8 genes
NF 0.55
%ile 76.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6178.70.84EBro07_SQ002_B11_atEBro07_SQ002_B11--3e+0At3g56380ARR17 (ARABIDOPSIS RESPONSE REGULATOR 17)O.I.H.G.S.X.
0.7589.50.89Contig17953_atContig17953--2e+0At3g47100unknown proteinO.I.H.G.S.X.
0.6077.30.89Contig11946_atContig11946--2e+0At1g49950DNA-binding protein, putativeO.I.H.G.S.X.
0.4661.00.87Contig4445_atContig4445--3e-1At2g32190unknown proteinO.I.H.G.S.X.
0.4661.00.92Contig13318_atContig13318--1e-2At3g59010pectinesterase family proteinO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.093.8GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.893.1GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
2.591.9GSM261036Dicktoo-subzero-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
2.591.9GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO
2.491.4GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
2.390.9GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
2.390.9GSM282039Malting_day4_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.290.3GSM160464drought control rep1GSE6990Barley drought stressLink to GEO
2.290.3GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
2.290.3GSM261025ABA-Early-rep2GSE10328ABA experimentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Back to the CoP portal site

Back to the KAGIANA project homepage