Co-expression analysis

Gene ID	EBro04_SQ003_G13_at
Gene name
Homology with Arabidopsis	Similar to At5g44450: methyltransferase (HF=2e+0)
Module size	6 genes
NF	0.70
%ile	91.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.91	EBro04_SQ003_G13_at	EBro04_SQ003_G13	-	-	2e+0	At5g44450	methyltransferase	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.91	EBro02_SQ004_K12_at	EBro02_SQ004_K12	-	-	5e+0	At5g09370	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.91	Contig10409_at	Contig10409	-	-	2e+0	At1g54200	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.91	Contig25694_at	Contig25694	-	-	2e+0	At4g12860	UNE14 (unfertilized embryo sac 14)	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.91	Contig10168_at	Contig10168	-	-	3e-2	At5g26170	WRKY50	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.91	Contig10169_at	Contig10169	-	-	3e-13	At2g23390	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.7	99.5	GSM311254	hsp5_with_aphids_2	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
12.7	99.4	GSM311258	hsp5_without_aphids_3	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
11.4	99.3	GSM363461	Control (C) - rep2	GSE14521	Late response to boron toxicity in barley leaves
10.2	99.1	GSM363467	10 mM B(OH)3 treatment (10B) - rep2	GSE14521	Late response to boron toxicity in barley leaves
8.9	98.9	GSM311257	hsp5_without_aphids_2	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
8.3	98.8	GSM311256	hsp5_without_aphids_1	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
7.8	98.6	GSM363465	5 mM B(OH)3 treatment (5B) - rep3	GSE14521	Late response to boron toxicity in barley leaves
7.6	98.6	GSM311255	hsp5_with_aphids_3	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
6.8	98.3	GSM363463	5 mM B(OH)3 treatment (5B) - rep1	GSE14521	Late response to boron toxicity in barley leaves
5.0	97.2	GSM372946	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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