Co-expression analysis

Gene ID	EBro02_SQ004_D16_at
Gene name
Homology with Arabidopsis	Similar to At5g42510: disease resistance-responsive family protein (HF=4e+0)
Module size	6 genes
NF	0.17
%ile	20.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.92	EBro02_SQ004_D16_at	EBro02_SQ004_D16	-	-	4e+0	At5g42510	disease resistance-responsive family protein	O.I.	H.G.	S.X.	Please select
0.31	38.6	0.96	HA30O17r_at	HA30O17r	-	-	9e-10	At4g33865	40S ribosomal protein S29 (RPS29C)	O.I.	H.G.	S.X.	Please select
0.21	22.6	0.95	HZ47I09r_at	HZ47I09r	-	-	7e-1	At2g40085	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	11.6	0.96	Contig23039_at	Contig23039	-	-	4e-2	At2g45920	U-box domain-containing protein	O.I.	H.G.	S.X.	Please select
0.09	7.4	0.96	HW03P01u_at	HW03P01u	-	-	1e+1	At5g13190	-	O.I.	H.G.	S.X.	Please select
0.09	7.4	0.96	Contig245_s_at	Contig245	-	-	2e+0	At4g16380	metal ion binding	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.7	99.5	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
13.5	99.5	GSM238411	Pericarp 8DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
10.1	99.1	GSM440962	Stressed lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
6.5	98.2	GSM146359	Golden Promise Root Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.4	97.5	GSM238409	Pericarp 4DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
4.5	96.7	GSM146368	Maythorpe Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.5	96.7	GSM146365	Maythorpe Root Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.4	96.6	GSM238408	Pericarp 4DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.9	95.8	GSM215731	gibberellin treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.4	94.8	GSM146362	Golden Promise Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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