Co-expression analysis

Gene ID EBpi07_SQ002_E06_at
Gene name
Homology with ArabidopsisSimilar to At1g44835: YbaK/prolyl-tRNA synthetase family protein (HF=2e+0)
Module size 8 genes
NF 0.86
%ile 98.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5572.00.93EBpi07_SQ002_E06_atEBpi07_SQ002_E06--2e+0At1g44835YbaK/prolyl-tRNA synthetase family proteinO.I.H.G.S.X.
0.9398.70.95Contig12750_atContig12750--5e-1At5g28630glycine-rich proteinO.I.H.G.S.X.
0.8895.20.96HA20A06r_atHA20A06r--2e-1At1g61820BGLU46 (BETA GLUCOSIDASE 46)O.I.H.G.S.X.
0.8895.20.96Contig8260_s_atContig8260--2e+0At1g65230unknown proteinO.I.H.G.S.X.
0.8694.80.96Contig15825_atContig15825--8e+0At5g03020kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.8694.80.96Contig3122_atContig3122--1e+0At5g66815unknown proteinO.I.H.G.S.X.
0.8092.50.96Contig14594_atContig14594--5e-17At5g54080HGO (HOMOGENTISATE 1,2-DIOXYGENASE)O.I.H.G.S.X.
0.8092.50.96Contig5567_s_atContig5567--8e-35At4g13430IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.899.5GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
10.099.1GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
9.999.1GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.496.6GSM398262HS41-1_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.595.1GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.494.8GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.394.6GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
3.294.3GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM261037Dicktoo-subzero-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO
3.093.8GSM440974Stressed awn_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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