Co-expression analysis

Gene ID	EBpi01_SQ002_O15_at
Gene name
Homology with Arabidopsis	Similar to At5g47130: Bax inhibitor-1 family / BI-1 family (HF=2e+0)
Module size	6 genes
NF	0.69
%ile	90.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.91	EBpi01_SQ002_O15_at	EBpi01_SQ002_O15	-	-	2e+0	At5g47130	Bax inhibitor-1 family / BI-1 family	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.91	Contig5966_at	Contig5966	-	-	9e-2	At4g33360	terpene cyclase/mutase-related	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.90	HW04C21u_at	HW04C21u	-	-	5e+0	At3g56230	speckle-type POZ protein-related	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.92	Contig5763_s_at	Contig5763	C-8,7-sterol isomerase	-	2e+0	At2g14890	AGP9 (ARABINOGALACTAN PROTEIN 9)	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.91	Contig2772_s_at	Contig2772	-	-	4e-50	At5g49910	CPHSC70-2EAT SHOCK PROTEIN 70-2 (CHLOROPLAST HEAT SHOCK PROTEIN 70-2)	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.94	Contig13318_at	Contig13318	-	-	1e-2	At3g59010	pectinesterase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.5	99.0	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
5.8	97.8	GSM282033	Malting_day4_Harrington_rep4	GSE11200	Expression data from malting barley seeds
5.1	97.3	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.9	97.1	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.8	97.0	GSM213441	Barley seeds control in Hoagland solution for 12hr	GSE8618	P. aeruginosa virulent factor to barley
4.8	97.0	GSM261043	before 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.6	96.8	GSM238435	Embryo 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
4.5	96.7	GSM238436	Embryo 48 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.0	96.0	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
3.8	95.7	GSM261042	before 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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