Co-expression analysis

Gene ID	EBpi01_SQ002_G19_at
Gene name
Homology with Arabidopsis	Similar to At3g16440: ATMLP-300B (MYROSINASE-BINDING PROTEIN-LIKE PROTEIN-300B) (HF=2e+0)
Module size	7 genes
NF	0.80
%ile	96.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	87.1	0.99	EBpi01_SQ002_G19_at	EBpi01_SQ002_G19	-	-	2e+0	At3g16440	ATMLP-300B (MYROSINASE-BINDING PROTEIN-LIKE PROTEIN-300B)	O.I.	H.G.	S.X.	Please select
0.86	94.8	1.00	Contig949_at	Contig949	-	-	8e-28	At1g29910	CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.77	90.8	1.00	HVSMEk0006G04r2_at	HVSMEk0006G04r2	-	-	2e-1	At4g37790	HAT22	O.I.	H.G.	S.X.	Please select
0.77	90.8	1.00	Contig394_at	Contig394	-	-	1e+0	At5g42850	-	O.I.	H.G.	S.X.	Please select
0.77	90.8	1.00	Contig8821_at	Contig8821	-	-	4e-9	At5g45190	cyclin family protein	O.I.	H.G.	S.X.	Please select
0.71	87.1	1.00	EBan01_SQ005_B22_s_at	EBan01_SQ005_B22	-	-	5e+0	At1g30630	coatomer protein epsilon subunit family protein / COPE family protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	1.00	Contig20753_at	Contig20753	-	-	5e-7	At2g20900	diacylglycerol kinase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
44.2	99.9	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
43.7	99.9	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
19.5	99.7	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
8.9	98.9	GSM372973	genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.9	98.7	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.1	98.4	GSM238426	Endosperm 72 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.5	97.6	GSM238438	Embryo 72 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.9	97.1	GSM372970	genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.5	96.7	GSM373009	genotype: 11542 - pathogen isolates: K1 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.0	96.0	GSM238411	Pericarp 8DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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