Co-expression analysis

Gene ID EBpi01_SQ001_A05_s_at
Gene name
Homology with ArabidopsisSimilar to At2g31005: - (HF=3e+0)
Module size 6 genes
NF 0.71
%ile 92.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.50.87EBpi01_SQ001_A05_s_atEBpi01_SQ001_A05--3e+0At2g31005-O.I.H.G.S.X.
0.8394.00.85Contig14553_atContig14553--2e+0At2g27790nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.7187.10.81HV_CEb0012I09r2_x_atHV_CEb0012I09r2--5e-1At1g72890disease resistance protein (TIR-NBS class), putativeO.I.H.G.S.X.
0.6077.30.86Contig5659_atContig5659--1e+0At1g34290AtRLP5 (Receptor Like Protein 5)O.I.H.G.S.X.
0.4458.90.90Contig13383_atContig13383--1e-8At2g48010RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3)O.I.H.G.S.X.
0.4053.10.89Contig10688_atContig10688--8e+0At5g65430GRF8 (GENERAL REGULATORY FACTOR 8)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.099.1GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
7.798.6GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.997.1GSM146376Maythorpe shoot Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.696.8GSM146379Maythorpe shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.296.3GSM398264HS41-1_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.196.2GSM311255hsp5_with_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
4.096.0GSM146374Golden Promise shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.995.8GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.995.8GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.995.8GSM146371Golden Promise shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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