Co-expression analysis

Gene ID EBma04_SQ003_K13_s_at
Gene name
Homology with ArabidopsisSimilar to At3g60520: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.60
%ile 82.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.70.96EBma04_SQ003_K13_s_atEBma04_SQ003_K13--2e+0At3g60520unknown proteinO.I.H.G.S.X.
0.9198.10.97Contig3563_atContig3563--2e+0At5g54000oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.6784.70.98Contig5417_atContig5417--4e+0At5g47610zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6178.70.98Contig2986_atContig2986--1e-39At3g28710H+-transporting two-sector ATPase, putativeO.I.H.G.S.X.
0.4762.20.97Contig4563_atContig4563--5e-15At3g17240mtLPD2 (LIPOAMIDE DEHYDROGENASE 2)O.I.H.G.S.X.
0.4458.90.97Contig3118_atContig3118--3e-68At3g27240cytochrome c1, putativeO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.3GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
2.692.3GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
2.591.9GSM282027Malting_day1_Legacy_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.491.4GSM1608317% SWC rep1GSE6990Barley drought stressLink to GEO
2.491.4GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
2.491.4GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
2.390.9GSM261024ABA-Early-rep1GSE10328ABA experimentLink to GEO
2.390.9GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.290.3GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.290.3GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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