Co-expression analysis

Gene ID EBma03_SQ003_P07_at
Gene name
Homology with ArabidopsisSimilar to At2g39900: LIM domain-containing protein (HF=3e+0)
Module size 6 genes
NF 0.34
%ile 45.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.92EBma03_SQ003_P07_atEBma03_SQ003_P07--3e+0At2g39900LIM domain-containing proteinO.I.H.G.S.X.
0.3240.30.96Contig20777_atContig20777--1e-1At3g47640basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.3037.00.97EBem04_SQ003_H15_atEBem04_SQ003_H15--3e+0At5g33806unknown proteinO.I.H.G.S.X.
0.2935.50.97Contig12986_atContig12986--7e-13At3g28007nodulin MtN3 family proteinO.I.H.G.S.X.
0.2528.90.95EBem06_SQ002_C05_atEBem06_SQ002_C05--4e+0At5g55131-O.I.H.G.S.X.
0.1615.30.97V00087.1_atV00087.1--3e-1At5g43525-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.299.7GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
10.099.1GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.498.8GSM282032Malting_day1_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
5.797.7GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
5.697.7GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
5.597.6GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
5.297.4GSM282022Malting_day4_Merit_rep4GSE11200Expression data from malting barley seedsLink to GEO
5.197.3GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.197.3GSM282020Malting_day4_Legacy_rep 3GSE11200Expression data from malting barley seedsLink to GEO
4.897.0GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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