Co-expression analysis

Gene ID EBem04_SQ002_C07_s_at
Gene name
Homology with ArabidopsisSimilar to At5g19151: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.60
%ile 82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.84EBem04_SQ002_C07_s_atEBem04_SQ002_C07--3e+0At5g19151unknown proteinO.I.H.G.S.X.
0.9198.10.87Contig13424_atContig13424--2e+0At3g42310unknown proteinO.I.H.G.S.X.
0.5369.70.84Contig15476_atContig15476--2e+0At1g48325Expressed proteinO.I.H.G.S.X.
0.4458.90.88Contig4809_atContig4809--9e-2At1g64370unknown proteinO.I.H.G.S.X.
0.3647.10.90Contig18125_atContig18125--2e-6At4g13250short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.3138.60.90Contig2878_atContig2878--4e-1At3g496302-oxoacid-dependent oxidase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.299.8GSM363461Control (C) - rep2GSE14521Late response to boron toxicity in barley leavesLink to GEO
21.799.8GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
12.299.4GSM3634655 mM B(OH)3 treatment (5B) - rep3GSE14521Late response to boron toxicity in barley leavesLink to GEO
8.898.9GSM36346710 mM B(OH)3 treatment (10B) - rep2GSE14521Late response to boron toxicity in barley leavesLink to GEO
8.298.7GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
6.798.3GSM261043before 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
6.798.3GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.997.9GSM372953genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.897.0GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.796.9GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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