Co-expression analysis

Gene ID	EBed02_SQ002_A05_at
Gene name
Homology with Arabidopsis	Similar to At5g67400: peroxidase 73 (PER73) (P73) (PRXR11) (HF=1e+1)
Module size	6 genes
NF	0.55
%ile	75.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.96	EBed02_SQ002_A05_at	EBed02_SQ002_A05	-	-	1e+1	At5g67400	peroxidase 73 (PER73) (P73) (PRXR11)	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.96	Contig9024_s_at	Contig9024	-	-	3e+0	At5g25310	catalytic	O.I.	H.G.	S.X.	Please select
0.57	74.9	0.94	Contig24733_at	Contig24733	-	-	5e+0	At3g48840	nucleic acid binding / nucleotide binding	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.94	Contig15990_at	Contig15990	-	-	7e+0	At2g14910	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.97	EBpi07_SQ002_E06_at	EBpi07_SQ002_E06	-	-	2e+0	At1g44835	YbaK/prolyl-tRNA synthetase family protein	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.94	Contig18848_at	Contig18848	-	-	1e-1	At4g36780	transcription regulator	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
45.6	99.9	GSM238412	Endosperm 4DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
11.3	99.3	GSM238413	Endosperm 4DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
5.4	97.5	GSM398262	HS41-1_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.9	97.1	GSM146377	Maythorpe shoot Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.2	96.3	GSM282040	Malting_kilned_Morex_rep2	GSE11200	Expression data from malting barley seeds
4.1	96.2	GSM146371	Golden Promise shoot Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.0	96.0	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
4.0	96.0	GSM282026	Malting_day1_Legacy_rep4	GSE11200	Expression data from malting barley seeds
3.9	95.8	GSM146379	Maythorpe shoot Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.6	95.3	GSM238438	Embryo 72 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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