Co-expression analysis

Gene ID	EBan01_SQ003_J01_at
Gene name
Homology with Arabidopsis	Similar to At2g41905: unknown protein (HF=2e-1)
Module size	6 genes
NF	0.80
%ile	96.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	1.00	EBan01_SQ003_J01_at	EBan01_SQ003_J01	-	-	2e-1	At2g41905	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	94.0	1.00	Contig17376_at	Contig17376	-	-	2e+0	At5g16090	-	O.I.	H.G.	S.X.	Please select
0.80	92.5	1.00	Contig9898_at	Contig9898	-	-	3e-3	At2g35780	scpl26 (serine carboxypeptidase-like 26)	O.I.	H.G.	S.X.	Please select
0.80	92.5	1.00	Contig15860_at	Contig15860	-	-	1e-13	At1g34420	leucine-rich repeat family protein / protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.71	87.1	1.00	Contig6434_at	Contig6434	-	-	3e-9	At1g07310	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.53	69.7	1.00	Contig9959_at	Contig9959	-	-	4e-4	At1g02840	SR1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
30.4	99.9	GSM261042	before 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
27.5	99.8	GSM261044	before 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
15.6	99.6	GSM261043	before 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
9.5	99.0	GSM215731	gibberellin treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
5.9	97.9	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.5	97.6	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.5	96.7	GSM215728	gibberellin treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
4.2	96.3	GSM238426	Endosperm 72 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.9	95.8	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.4	94.8	GSM440972	Stressed awn_Rep1	GSE17669	Gene expression in the barley spike during drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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